SMTL ID : 2tdm.1

STRUCTURE OF THYMIDYLATE SYNTHASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

2 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)

UMP.1: 15 residues within 4Å: Chain A: R.23, L.195, C.198, H.199, Q.217, R.218, S.219, A.220, D.221, G.225, N.229, H.259, Y.261 Chain B: R.178, R.179 13 PLIP interactions: 11 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Q.217, A:S.219, A:S.219, A:D.221, A:N.229, A:N.229, A:H.259 Water bridges: A:D.221, A:D.221 Salt bridges: A:R.23, A:R.218, B:R.178, B:R.179 UMP.2: 15 residues within 4Å: Chain A: R.178, R.179 Chain B: R.23, L.195, C.198, H.199, Q.217, R.218, S.219, A.220, D.221, G.225, N.229, H.259, Y.261 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.217, B:S.219, B:S.219, B:D.221, B:N.229, B:N.229, B:H.259, B:Y.261 Water bridges: B:Y.146 Salt bridges: B:R.23, B:R.218, A:R.178, A:R.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Finer-Moore, J. et al., Refined structures of substrate-bound and phosphate-bound thymidylate synthase from Lactobacillus casei. J.Mol.Biol. (1993)

Release Date

1997-08-20

Peptides

THYMIDYLATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

THYMIDYLATE SYNTHASE

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