Toggle navigation
SWISS-MODEL
SWISS-MODEL
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 1nnk.1
X-ray structure of the GluR2 ligand-binding core (S1S2J) in complex with (S)-ATPA at 1.85 A resolution. Crystallization with zinc ions.
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.85 Å
Oligo State
homo-dimer
Ligands
4 x
ZN
:
ZINC ION
(Non-covalent)
ZN.1:
3 residues within 4Å:
Chain A:
E.166
,
S.168
Ligands:
CL.3
2
PLIP interactions
:
2 interactions with chain A
Metal complexes:
A:E.166
,
A:E.166
ZN.2:
3 residues within 4Å:
Chain A:
E.42
,
K.45
,
H.46
3
PLIP interactions
:
2 interactions with chain A
,
1 Ligand-Water interactions
Metal complexes:
A:E.42
,
A:H.46
,
H
2
O.6
ZN.5:
3 residues within 4Å:
Chain B:
E.166
,
S.168
Ligands:
CL.7
2
PLIP interactions
:
2 interactions with chain B
Metal complexes:
B:E.166
,
B:E.166
ZN.6:
3 residues within 4Å:
Chain B:
E.42
,
K.45
,
H.46
3
PLIP interactions
:
2 interactions with chain B
,
1 Ligand-Water interactions
Metal complexes:
B:E.42
,
B:H.46
,
H
2
O.13
2 x
CL
:
CHLORIDE ION
(Non-functional Binders)
CL.3:
2 residues within 4Å:
Chain A:
E.166
Ligands:
ZN.1
Ligand excluded by PLIP
CL.7:
2 residues within 4Å:
Chain B:
E.166
Ligands:
ZN.5
Ligand excluded by PLIP
2 x
CE2
:
3-(5-TERT-BUTYL-3-OXIDOISOXAZOL-4-YL)-L-ALANINATE
(Non-covalent)
CE2.4:
14 residues within 4Å:
Chain A:
E.13
,
Y.61
,
P.89
,
L.90
,
T.91
,
R.96
,
G.141
,
S.142
,
T.143
,
T.174
,
L.192
,
E.193
,
M.196
,
Y.220
16
PLIP interactions
:
16 interactions with chain A
Hydrophobic interactions:
A:Y.61
,
A:Y.61
,
A:P.89
,
A:M.196
Hydrogen bonds:
A:P.89
,
A:T.91
,
A:S.142
,
A:S.142
,
A:T.143
,
A:T.143
,
A:T.143
,
A:E.193
,
A:E.193
Water bridges:
A:T.137
,
A:K.144
Salt bridges:
A:R.96
CE2.8:
14 residues within 4Å:
Chain B:
E.13
,
Y.61
,
P.89
,
L.90
,
T.91
,
R.96
,
G.141
,
S.142
,
T.143
,
T.174
,
L.192
,
E.193
,
M.196
,
Y.220
16
PLIP interactions
:
16 interactions with chain B
Hydrophobic interactions:
B:Y.61
,
B:Y.61
,
B:P.89
,
B:M.196
Hydrogen bonds:
B:P.89
,
B:T.91
,
B:S.142
,
B:S.142
,
B:T.143
,
B:T.143
,
B:T.143
,
B:E.193
,
B:E.193
Water bridges:
B:T.137
,
B:K.144
Salt bridges:
B:R.96
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Lunn, M.L. et al., Three-Dimensional Structure of the Ligand-Binding Core of GluR2 in Complex with the Agonist (S)-ATPA: Implications for Receptor Subunit Selectivity. J.Med.Chem. (2003)
Release Date
2003-03-04
Peptides
Glutamate receptor 2:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Glutamate receptor 2
Toggle Identical (AB)
Related Entries With Identical Sequence
1ftj.1
|
1ftj.2
|
1ftj.3
|
1ftj.4
|
1ftj.5
|
1ftl.1
|
1ftm.1
|
1ftm.2
|
1ftm.3
|
1ftm.4
|
1ftm.5
|
1fto.1
|
1fto.2
|
1fw0.1
|
1m5b.1
|
1m5b.2
|
1m5b.3
|
1m5c.1
|
1m5e.1
|
1m5e.2
|
1m5e.3
|
1mm6.1
|
1mm7.1
|
1mm7.2
|
1mqg.1
|
1mqi.1
|
1mqj.1
|
1ms7.1
|
1ms7.2
|
1ms7.3
more...
less...
1mxu.1
|
1mxu.2
|
1mxu.3
|
1mxv.1
|
1mxv.2
|
1mxv.3
|
1mxw.1
|
1mxw.2
|
1mxw.3
|
1mxx.1
|
1mxx.2
|
1mxx.3
|
1mxy.1
|
1mxy.2
|
1mxy.3
|
1mxz.1
|
1mxz.2
|
1mxz.3
|
1my0.1
|
1my0.2
|
1my0.3
|
1my1.1
|
1my1.2
|
1my1.3
|
1my2.1
|
1my2.2
|
1my2.3
|
1my3.1
|
1my3.2
|
1my4.1
|
1my4.2
|
1my4.3
|
1n0t.1
|
1n0t.2
|
1nnp.1
|
1syh.1
|
1wvj.1
|
2aix.1
|
2al4.1
|
2al4.2
|
2al5.1
|
2cmo.1
|
2p2a.1
|
3bft.1
|
3bft.2
|
3bfu.1
|
3bfu.2
|
3bfu.3
|
3bfu.4
|
3bki.1
|
3bki.2
|
3bki.3
|
3bki.4
|
3tza.1
|
4g8m.1
|
4g8m.2
|
4igt.1
|
4isu.1
|
4isu.2
|
4isu.3
|
4isu.4
|
4isu.5
|
4isu.6
|
4o3a.1
|
4o3a.2
|
4o3a.3
|
4o3b.1
|
4o3c.1
|
4z0i.1
|
4z0i.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme