- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.3: 14 residues within 4Å:- Chain A: Y.32, T.36, Y.144, L.152, L.153, D.177
- Chain B: F.129, N.133, R.137, F.168, T.169, K.170, H.257, K.258
13 PLIP interactions:2 interactions with chain A, 11 interactions with chain B- Hydrogen bonds: A:Y.32, A:L.152, B:N.133, B:F.168, B:K.170
- Water bridges: B:K.170, B:H.257
- Salt bridges: B:R.137, B:K.258, B:K.258, B:K.258
- pi-Stacking: B:H.257, B:H.257
ATP.4: 14 residues within 4Å:- Chain A: F.129, N.133, R.137, F.168, T.169, K.170, H.257, K.258
- Chain B: Y.32, T.36, Y.144, L.152, L.153, D.177
15 PLIP interactions:12 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:N.133, A:K.170, A:K.170, B:Y.32, B:L.152
- Water bridges: A:R.137, A:R.251, A:H.257, B:Y.144
- Salt bridges: A:R.137, A:K.258, A:K.258, A:K.258
- pi-Stacking: A:H.257, A:H.257
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
AMP.5: 17 residues within 4Å:- Chain B: L.43, G.44, I.45, S.46, S.51, V.77, R.78, L.79, Q.84, R.139, T.157, E.162, D.173, T.208, A.209
- Ligands: MG.1, POP.6
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:S.51, B:R.78, B:R.78, B:L.79, B:Q.84, B:R.139, B:T.157, B:T.208
- Water bridges: B:S.46, B:S.46, B:D.50, B:D.50, B:R.139
AMP.7: 17 residues within 4Å:- Chain A: L.43, G.44, I.45, S.46, S.51, V.77, R.78, L.79, Q.84, R.139, T.157, E.162, D.173, T.208, A.209
- Ligands: MG.2, POP.8
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:S.51, A:R.78, A:L.79, A:Q.84, A:T.208
- Water bridges: A:R.139, A:R.139, A:T.157, A:T.157
- 2 x POP: PYROPHOSPHATE 2-(Non-covalent)
POP.6: 11 residues within 4Å:- Chain B: S.46, G.48, Q.49, D.50, S.51, E.162, K.186, P.207, T.208
- Ligands: MG.1, AMP.5
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:S.46, B:S.46, B:G.48, B:Q.49, B:D.50, B:D.50, B:S.51, B:T.208
- Water bridges: B:K.186
- Salt bridges: B:K.186
POP.8: 11 residues within 4Å:- Chain A: S.46, G.48, Q.49, D.50, S.51, E.162, K.186, P.207, T.208
- Ligands: MG.2, AMP.7
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:S.46, A:S.46, A:G.48, A:Q.49, A:D.50, A:S.51, A:T.208
- Water bridges: A:T.157, A:E.162
- Salt bridges: A:K.186
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rizzi, M. et al., Crystal structure of NH3-dependent NAD+ synthetase from Bacillus subtilis. EMBO J. (1996)
- Release Date
- 1997-07-23
- Peptides
- NAD SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 2 x POP: PYROPHOSPHATE 2-(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rizzi, M. et al., Crystal structure of NH3-dependent NAD+ synthetase from Bacillus subtilis. EMBO J. (1996)
- Release Date
- 1997-07-23
- Peptides
- NAD SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B