SMTL ID : 1nt1.1

thrombin in complex with selective macrocyclic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-oligomer

Ligands

1 x T76: (6R,21AS)-17-CHLORO-6-CYCLOHEXYL-2,3,6,7,10,11,19,20-OCTAHYDRO-1H,5H-PYRROLO[1,2-K][1,4,8,11,14]BENZOXATETRAAZA-CYCLOHEPTADECINE-5,8,12,21(9H,13H,21AH)-TETRONE(Non-covalent)

T76.1: 14 residues within 4Å: Chain A: H.72, Y.76, W.79, I.208, A.229, S.234, V.254, S.255, W.256, G.257, G.259, C.260, G.267, F.268 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.76, A:W.79, A:I.208, A:I.208, A:V.254, A:W.256 Hydrogen bonds: A:S.255, A:G.257, A:G.257, A:G.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nantermet, P.G. et al., Design and synthesis of potent and selective macrocyclic thrombin inhibitors. Bioorg.Med.Chem.Lett. (2003)

Release Date

2003-09-02

Peptides

thrombin: A
Hirudin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

thrombin

Hirudin

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