SMTL ID : 1nuh.1

The crystal structure of human phosphoglucose isomerase complexed with 5-phosphoarabinonate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-dimer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: T.369, R.370 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.370, A:R.370 Salt bridges: A:R.370 SO4.2: 2 residues within 4Å: Chain A: N.25, R.28 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.25 Salt bridges: A:R.28 SO4.3: 1 residues within 4Å: Chain A: R.137 3 PLIP interactions: 3 interactions with chain A Water bridges: A:F.290, A:F.290 Salt bridges: A:R.137 SO4.4: 4 residues within 4Å: Chain A: R.135, W.141, K.142, K.241 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.135, A:D.140, A:K.142 Salt bridges: A:K.241 SO4.5: 3 residues within 4Å: Chain A: Y.174, K.481, T.483 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.174, A:Y.174 Salt bridges: A:K.481 SO4.6: 2 residues within 4Å: Chain A: T.150, R.180 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.150 Salt bridges: A:R.180 SO4.8: 2 residues within 4Å: Chain B: T.369, R.370 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.369, B:R.370, B:R.370 Salt bridges: B:R.370 SO4.9: 2 residues within 4Å: Chain B: N.25, R.28 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.25 Salt bridges: B:R.28 SO4.10: 1 residues within 4Å: Chain B: R.137 3 PLIP interactions: 3 interactions with chain B Water bridges: B:F.290, B:F.290 Salt bridges: B:R.137 SO4.11: 4 residues within 4Å: Chain B: R.135, W.141, K.142, K.241 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.135, B:D.140, B:K.142 Salt bridges: B:K.241 SO4.12: 3 residues within 4Å: Chain B: Y.174, K.481, T.483 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.174 Salt bridges: B:K.481 SO4.13: 2 residues within 4Å: Chain B: T.150, R.180 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.180

2 x PA5: 5-PHOSPHOARABINONIC ACID(Non-covalent)

PA5.7: 15 residues within 4Å: Chain A: I.157, G.158, G.159, S.160, S.210, K.211, T.212, T.215, R.273, Q.354, E.358, Q.512, V.515, K.519 Chain B: H.389 15 PLIP interactions: 2 interactions with chain B, 13 interactions with chain A Hydrogen bonds: B:H.389, B:H.389, A:G.159, A:S.160, A:S.160, A:S.160, A:K.211, A:T.212, A:T.212, A:T.215, A:R.273 Water bridges: A:G.272, A:G.272, A:Q.512 Salt bridges: A:K.519 PA5.14: 15 residues within 4Å: Chain A: H.389 Chain B: I.157, G.158, G.159, S.160, S.210, K.211, T.212, T.215, R.273, Q.354, E.358, Q.512, V.515, K.519 15 PLIP interactions: 13 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.159, B:S.160, B:S.160, B:S.160, B:K.211, B:T.212, B:T.212, B:T.215, B:R.273, A:H.389, A:H.389 Water bridges: B:G.272, B:G.272, B:Q.512 Salt bridges: B:K.519

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davies, C. et al., The structure of human phosphoglucose isomerase complexed with a transition-state analogue. Acta Crystallogr.,Sect.D (2003)

Release Date

2003-02-11

Peptides

glucose phosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

glucose phosphate isomerase

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