- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 7 x SO4: SULFATE ION(Non-functional Binders)
- 2 x IMH: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL(Non-covalent)
IMH.5: 17 residues within 4Å:- Chain A: V.68, R.90, S.93, C.94, G.95, Y.162, V.183, E.184, M.185, E.186, D.208, P.211, W.214
- Chain B: H.9, R.47
- Ligands: SO4.1, IPA.13
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:M.185, A:E.186, A:D.208, B:H.9
- Water bridges: A:Y.162, A:D.208
- pi-Stacking: A:Y.162
IMH.12: 17 residues within 4Å:- Chain A: H.9, R.47
- Chain B: V.68, R.90, S.93, C.94, G.95, Y.162, V.183, E.184, M.185, E.186, D.208, P.211, W.214
- Ligands: IPA.6, SO4.9
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:R.90, B:M.185, B:E.186, B:D.208, A:H.9, A:R.47
- Water bridges: B:D.208
- 7 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.6: 5 residues within 4Å:- Chain A: R.8, N.46, R.47
- Chain B: F.219
- Ligands: IMH.12
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:F.219
- Hydrogen bonds: A:R.47
IPA.7: 5 residues within 4Å:- Chain A: R.118, H.121, L.122
- Chain B: R.171
- Ligands: IPA.8
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:H.121, A:L.122
- Hydrogen bonds: A:R.118
- Water bridges: B:R.171
IPA.8: 4 residues within 4Å:- Chain A: H.121, H.125
- Ligands: SO4.4, IPA.7
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.125
- Water bridges: A:G.126
IPA.13: 4 residues within 4Å:- Chain B: R.8, N.46, R.47
- Ligands: IMH.5
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Water bridges: A:D.208, A:D.208
- Hydrogen bonds: B:R.47
IPA.14: 4 residues within 4Å:- Chain A: R.171
- Chain B: R.118, H.121, L.122
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:H.121, B:L.122
- Hydrogen bonds: B:R.118
IPA.15: 3 residues within 4Å:- Chain B: H.121, H.125
- Ligands: SO4.10
1 PLIP interactions:1 interactions with chain B- Water bridges: B:G.126
IPA.16: 1 residues within 4Å:- Chain B: R.171
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shi, W. et al., Plasmodium falciparum Purine Nucleoside Phosphorylase: CRYSTAL STRUCTURES, IMMUCILLIN INHIBITORS, AND DUAL CATALYTIC FUNCTION. J.Biol.Chem. (2004)
- Release Date
- 2004-03-16
- Peptides
- uridine phosphorylase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 7 x SO4: SULFATE ION(Non-functional Binders)
- 2 x IMH: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL(Non-covalent)
- 7 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shi, W. et al., Plasmodium falciparum Purine Nucleoside Phosphorylase: CRYSTAL STRUCTURES, IMMUCILLIN INHIBITORS, AND DUAL CATALYTIC FUNCTION. J.Biol.Chem. (2004)
- Release Date
- 2004-03-16
- Peptides
- uridine phosphorylase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B