SMTL ID : 1o1t.1

Structure of FPT bound to the CVIM-FPP product

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain B: H.194, E.198 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.194, B:E.198, H2O.13, H2O.14

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain B: D.297, C.299, Y.361, H.362 Ligands: 2NH.3 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.297, B:D.297, B:C.299, B:H.362

1 x 2NH: N-ACETYL-S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL]-L-CYSTEINYL-D-VALYL-L-ISOLEUCYL-L-METHIONINE(Non-covalent)

2NH.3: 23 residues within 4Å: Chain A: Y.134, K.167, Y.169, Q.170 Chain B: A.98, S.99, W.102, W.106, A.151, P.152, R.202, Y.205, C.206, H.248, G.250, C.254, D.297, C.299, Y.300, W.303, Y.361, H.362 Ligands: ZN.2 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.102, B:W.102, B:W.106, B:Y.205, B:W.303, B:W.303 Hydrogen bonds: B:R.202, A:Q.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Turek-Etienne, T.C. et al., Biochemical and Structural Studies with Prenyl Diphosphate Analogues Provide Insights into Isoprenoid Recognition by Protein Farnesyl Transferase. Biochemistry (2003)

Release Date

2003-05-06

Peptides

Protein farnesyltransferase alpha subunit: A
Protein farnesyltransferase beta subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein farnesyltransferase alpha subunit

Protein farnesyltransferase beta subunit

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