- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UFP: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 4 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
EPE.2: 8 residues within 4Å:- Chain A: R.90, H.91, R.92, N.181, L.185
- Chain C: R.177
- Ligands: UFP.10, PGE.12
9 PLIP interactions:6 interactions with chain A, 2 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: A:R.90, A:R.92, A:N.181
- Water bridges: A:R.90, A:I.93, C:T.67, D:N.97
- Salt bridges: A:R.92, C:R.177
EPE.4: 6 residues within 4Å:- Chain B: R.90, H.91, R.92, N.181
- Chain D: R.177
- Ligands: UFP.7
10 PLIP interactions:7 interactions with chain B, 3 interactions with chain D- Hydrogen bonds: B:R.90, B:R.92, B:N.181
- Water bridges: B:R.90, B:R.90, B:I.93, D:R.177, D:R.177
- Salt bridges: B:R.92, D:R.177
EPE.6: 9 residues within 4Å:- Chain A: H.65, T.67, R.177
- Chain C: R.90, H.91, R.92, N.181, R.186
- Ligands: UFP.3
10 PLIP interactions:6 interactions with chain C, 4 interactions with chain A- Hydrogen bonds: C:R.90, C:R.92, C:N.181, A:H.65
- Water bridges: C:I.93, A:R.177, A:R.177
- Salt bridges: C:R.92, A:R.177
- pi-Cation interactions: C:H.91
EPE.9: 7 residues within 4Å:- Chain B: R.177
- Chain D: R.90, H.91, R.92, N.181, L.185
- Ligands: UFP.1
8 PLIP interactions:1 interactions with chain B, 7 interactions with chain D- Salt bridges: B:R.177, D:H.91, D:R.92
- Hydrogen bonds: D:R.90, D:R.92, D:N.181
- Water bridges: D:R.90, D:I.93
- 4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.5: 9 residues within 4Å:- Chain A: R.92, I.93, A.94
- Chain B: E.70, I.93, N.175, R.177
- Chain D: R.92, I.93
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.175, B:N.175
PGE.8: 7 residues within 4Å:- Chain A: I.93, R.177, S.178
- Chain B: R.92, A.94
- Chain C: R.92, I.93
1 PLIP interactions:1 interactions with chain A- Water bridges: A:N.175
PGE.11: 10 residues within 4Å:- Chain B: R.92, I.93
- Chain C: R.92, I.93, A.94, S.95
- Chain D: E.70, I.93, N.175, R.177
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:S.95, D:N.175, D:R.177
- Water bridges: C:S.95
PGE.12: 8 residues within 4Å:- Chain A: R.92, I.93
- Chain C: E.70, I.93, R.177
- Chain D: A.94, S.95
- Ligands: EPE.2
6 PLIP interactions:4 interactions with chain C, 1 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: C:E.70, C:R.177, A:R.92, D:S.95
- Water bridges: C:N.175, C:N.175
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mathews, I.I. et al., Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein. Structure (2003)
- Release Date
- 2003-06-24
- Peptides
- Thymidylate synthase thyX: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UFP: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 4 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- 4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mathews, I.I. et al., Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein. Structure (2003)
- Release Date
- 2003-06-24
- Peptides
- Thymidylate synthase thyX: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D