SMTL ID : 1ohf.1 (3 other biounits)

The refined structure of Nudaurelia capensis omega virus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-4-4-mer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.182, D.207 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.182, A:D.182, A:D.207 MG.2: 3 residues within 4Å: Chain C: D.182, D.207 Chain G: G.330 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain G Metal complexes: C:D.182, C:D.207, G:G.330 MG.3: 2 residues within 4Å: Chain E: D.182, D.207 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:D.182, E:D.182, E:D.207 MG.4: 2 residues within 4Å: Chain G: D.182, D.207 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:D.182, G:D.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Helgstrand, C. et al., The Refined Structure of Nudaurelia Capensis Omega Virus Reveals Control Elements for a T = 4 Capsid Maturation. Virology (2004)

Release Date

2004-02-26

Peptides

p70: ACEG
p70: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

E
C

G
D

B
E

D
F

F
G

H
H

p70

p70

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