- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
NAI.3: 31 residues within 4Å:- Chain A: I.71, G.72, G.74, G.75, N.76, N.77, W.147, D.148, I.149, S.184, I.185, R.198, W.243, T.244, A.245, N.246, T.247, P.277, G.295, S.296, D.320, L.321, S.323, N.355, D.356, K.369, D.438, A.442, K.489
- Ligands: PO4.1, GOL.5
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:L.321
- Hydrogen bonds: A:G.74, A:N.76, A:N.76, A:N.77, A:N.77, A:I.149, A:S.184, A:I.185, A:R.198, A:R.198, A:A.245, A:N.246, A:N.246, A:T.247, A:S.323, A:N.355, A:D.356, A:K.369, A:D.438
- Water bridges: A:G.75, A:G.78, A:R.198, A:T.247, A:T.247, A:N.354, A:N.354, A:N.355, A:N.355, A:D.356
NAI.4: 30 residues within 4Å:- Chain B: I.71, G.72, G.74, G.75, N.76, N.77, W.147, D.148, I.149, S.184, I.185, R.198, T.244, A.245, N.246, T.247, P.277, G.295, S.296, D.320, L.321, S.323, N.355, D.356, K.369, D.438, A.442, K.489
- Ligands: PO4.2, GOL.6
29 PLIP interactions:29 interactions with chain B- Hydrophobic interactions: B:L.321
- Hydrogen bonds: B:G.74, B:N.76, B:N.77, B:N.77, B:I.149, B:S.184, B:I.185, B:R.198, B:R.198, B:A.245, B:N.246, B:S.323, B:D.356, B:D.438
- Water bridges: B:G.75, B:N.76, B:N.76, B:N.76, B:G.78, B:Y.187, B:T.244, B:T.247, B:T.247, B:N.354, B:N.355, B:N.355, B:D.356, B:D.356
NAI.9: 31 residues within 4Å:- Chain C: I.71, G.72, G.74, G.75, N.76, N.77, W.147, D.148, I.149, S.184, I.185, R.198, W.243, T.244, A.245, N.246, T.247, P.277, G.295, S.296, D.320, L.321, S.323, N.355, D.356, K.369, D.438, A.442, K.489
- Ligands: PO4.7, GOL.11
30 PLIP interactions:30 interactions with chain C- Hydrophobic interactions: C:L.321
- Hydrogen bonds: C:G.74, C:N.76, C:N.76, C:N.77, C:N.77, C:I.149, C:S.184, C:I.185, C:R.198, C:R.198, C:A.245, C:N.246, C:N.246, C:S.323, C:N.355, C:D.356, C:K.369, C:D.438
- Water bridges: C:G.75, C:G.78, C:R.198, C:T.244, C:T.247, C:N.354, C:N.354, C:N.355, C:N.355, C:D.356, C:D.438
NAI.10: 30 residues within 4Å:- Chain D: I.71, G.72, G.74, G.75, N.76, N.77, W.147, D.148, I.149, S.184, I.185, R.198, T.244, A.245, N.246, T.247, P.277, G.295, S.296, D.320, L.321, S.323, N.355, D.356, K.369, D.438, A.442, K.489
- Ligands: PO4.8, GOL.12
28 PLIP interactions:28 interactions with chain D- Hydrophobic interactions: D:L.321
- Hydrogen bonds: D:G.74, D:N.76, D:N.77, D:N.77, D:I.149, D:S.184, D:I.185, D:R.198, D:R.198, D:A.245, D:N.246, D:T.247, D:S.323, D:D.356, D:D.438
- Water bridges: D:G.75, D:N.76, D:N.76, D:N.76, D:G.78, D:Y.187, D:T.247, D:N.354, D:N.355, D:N.355, D:D.356, D:D.438
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 11 residues within 4Å:- Chain A: N.350, L.352, D.356, L.360, K.369, K.373, I.402, K.412, D.438
- Ligands: PO4.1, NAI.3
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:N.350, A:D.356, A:K.373, A:K.412, A:K.412
- Water bridges: A:D.356
GOL.6: 10 residues within 4Å:- Chain B: N.350, L.352, D.356, K.369, K.373, I.402, K.412, D.438
- Ligands: PO4.2, NAI.4
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:K.373, B:K.373, B:K.412, B:D.438
GOL.11: 11 residues within 4Å:- Chain C: N.350, L.352, D.356, L.360, K.369, K.373, I.402, K.412, D.438
- Ligands: PO4.7, NAI.9
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:N.350, C:D.356, C:K.373, C:K.412, C:K.412
- Water bridges: C:D.438
GOL.12: 10 residues within 4Å:- Chain D: N.350, L.352, D.356, K.369, K.373, I.402, K.412, D.438
- Ligands: PO4.8, NAI.10
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:K.373, D:K.373, D:K.412, D:D.438
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jin, X. et al., Structures of NAD(+)- and NADH-bound 1-l-myo-inositol 1-phosphate synthase. Acta Crystallogr.,Sect.D (2003)
- Release Date
- 2003-07-08
- Peptides
- Inositol-3-phosphate synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jin, X. et al., Structures of NAD(+)- and NADH-bound 1-l-myo-inositol 1-phosphate synthase. Acta Crystallogr.,Sect.D (2003)
- Release Date
- 2003-07-08
- Peptides
- Inositol-3-phosphate synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B