SMTL ID : 1p3h.3 (2 other biounits)

Crystal Structure of the Mycobacterium tuberculosis chaperonin 10 tetradecamer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-14-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.53 Chain B: D.51, E.55 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.51, H2O.1

18 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 8 residues within 4Å: Chain A: A.1, V.3, N.4, I.5, L.13, Y.80, Y.85 Ligands: MPD.3 Ligand excluded by PLIP MPD.3: 4 residues within 4Å: Chain A: A.1, N.4, E.64 Ligands: MPD.2 Ligand excluded by PLIP MPD.4: 9 residues within 4Å: Chain B: K.2, V.3, N.4, I.5, L.13, V.43, A.44, Y.80, Y.85 Ligand excluded by PLIP MPD.5: 7 residues within 4Å: Chain C: V.3, N.4, I.5, L.13, V.43, Y.80, Y.85 Ligand excluded by PLIP MPD.6: 6 residues within 4Å: Chain D: V.3, N.4, L.13, V.43, Y.80, Y.85 Ligand excluded by PLIP MPD.7: 4 residues within 4Å: Chain E: V.3, N.4, I.5, Y.85 Ligand excluded by PLIP MPD.8: 7 residues within 4Å: Chain F: V.3, N.4, I.5, L.13, V.43, Y.80, Y.85 Ligand excluded by PLIP MPD.9: 6 residues within 4Å: Chain G: V.3, N.4, I.5, L.13, V.43, Y.85 Ligand excluded by PLIP MPD.10: 7 residues within 4Å: Chain H: V.3, N.4, I.5, L.13, Y.80, Y.85 Ligands: MPD.11 Ligand excluded by PLIP MPD.11: 3 residues within 4Å: Chain H: Q.15, E.83 Ligands: MPD.10 Ligand excluded by PLIP MPD.12: 3 residues within 4Å: Chain H: V.45, E.64 Ligands: MPD.13 Ligand excluded by PLIP MPD.13: 1 residues within 4Å: Ligands: MPD.12 Ligand excluded by PLIP MPD.14: 6 residues within 4Å: Chain I: V.3, N.4, I.5, V.43, Y.80, Y.85 Ligand excluded by PLIP MPD.15: 5 residues within 4Å: Chain J: V.3, I.5, V.43, Y.80, Y.85 Ligand excluded by PLIP MPD.16: 4 residues within 4Å: Chain K: V.3, N.4, I.5, Y.80 Ligand excluded by PLIP MPD.17: 8 residues within 4Å: Chain L: V.3, N.4, I.5, L.13, V.43, A.44, Y.80, Y.85 Ligand excluded by PLIP MPD.18: 6 residues within 4Å: Chain M: V.3, N.4, I.5, L.13, Y.80, Y.85 Ligand excluded by PLIP MPD.19: 7 residues within 4Å: Chain N: V.3, N.4, I.5, L.13, V.43, A.44, Y.85 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roberts, M.M. et al., Mycobacterium tuberculosis chaperonin 10 heptamers self-associate through their biologically active loops. J.BACTERIOL. (2003)

Release Date

2003-07-15

Peptides

10 kDa chaperonin: ABCDEFGHIJKLMN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

10 kDa chaperonin

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