- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x AR3: CYTARABINE(Non-covalent)
AR3.2: 13 residues within 4Å:- Chain A: I.33, E.56, V.58, W.61, L.85, M.88, Y.89, F.99, Q.100, R.131, D.136, F.140, E.200
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:E.56, A:Q.100, A:R.131, A:R.131, A:D.136, A:E.200
- Water bridges: A:A.34, A:E.56, A:E.56, A:R.107
- pi-Stacking: A:F.140
AR3.5: 13 residues within 4Å:- Chain B: I.33, E.56, V.58, W.61, L.85, M.88, Y.89, F.99, Q.100, R.131, D.136, F.140, E.200
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:E.56, B:Y.89, B:Q.100, B:R.131, B:R.131, B:D.136, B:D.136, B:E.200, B:E.200
- Water bridges: B:A.34, B:K.37, B:R.107
- pi-Stacking: B:F.140
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.3: 16 residues within 4Å:- Chain A: N.32, A.34, A.35, G.36, K.37, S.38, T.39, E.130, R.191, L.194, R.195, V.241, E.243, D.244, F.245
- Ligands: MG.1
22 PLIP interactions:22 interactions with chain A- Hydrogen bonds: A:N.32, A:A.34, A:A.35, A:G.36, A:K.37, A:S.38, A:T.39, A:T.39, A:L.194, A:E.243, A:F.245
- Water bridges: A:K.37, A:K.37, A:K.37, A:S.38, A:T.39, A:R.197, A:R.197, A:R.197, A:R.197
- Salt bridges: A:K.37
- pi-Cation interactions: A:R.191
ADP.6: 16 residues within 4Å:- Chain B: N.32, A.34, A.35, G.36, K.37, S.38, T.39, E.130, R.191, L.194, R.195, V.241, E.243, D.244, F.245
- Ligands: MG.4
23 PLIP interactions:23 interactions with chain B- Hydrogen bonds: B:N.32, B:A.34, B:A.35, B:G.36, B:K.37, B:S.38, B:T.39, B:T.39, B:L.194, B:E.243, B:D.244, B:F.245
- Water bridges: B:K.37, B:K.37, B:K.37, B:S.38, B:T.39, B:R.197, B:R.197, B:R.197, B:R.197
- Salt bridges: B:K.37
- pi-Cation interactions: B:R.191
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sabini, E. et al., Structure of human dCK suggests strategies to improve anticancer and antiviral therapy. Nat.Struct.Biol. (2003)
- Release Date
- 2003-07-01
- Peptides
- Deoxycytidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x AR3: CYTARABINE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sabini, E. et al., Structure of human dCK suggests strategies to improve anticancer and antiviral therapy. Nat.Struct.Biol. (2003)
- Release Date
- 2003-07-01
- Peptides
- Deoxycytidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
B