SMTL ID : 1pmj.1

Crystal structure of Caldicellulosiruptor saccharolyticus CBM27-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.10, E.12, N.44, Y.46, D.176 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.10, A:E.12, A:Y.46, A:D.176, H2O.1

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: E.183 No protein-ligand interaction detected (PLIP) EDO.3: 5 residues within 4Å: Chain A: E.119, G.127, I.140, H.141, K.142 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.119, A:G.127, A:H.141

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 3 residues within 4Å: Chain A: P.6, R.181, E.183 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.6, A:R.181 Hydrogen bonds: A:E.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roske, Y. et al., High-resolution crystal structures of Caldicellulosiruptor strain Rt8B.4 carbohydrate-binding module CBM27-1 and its complex with mannohexaose. J.Mol.Biol. (2004)

Release Date

2004-06-22

Peptides

beta-1,4-mannanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

beta-1,4-mannanase

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