SMTL ID : 1pu7.2 (1 other biounit)

Crystal structure of H.pylori 3-methyladenine DNA glycosylase (MagIII) bound to 3,9-dimethyladenine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x 39A: 6-AMINO-3,9-DIMETHYL-9H-PURIN-3-IUM(Non-covalent)

39A.1: 8 residues within 4Å: Chain A: W.24, W.25, P.26, T.40, F.45, V.207, E.208, K.211 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.208, A:K.211 pi-Stacking: A:W.24, A:W.25, A:W.25, A:F.45

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 3 residues within 4Å: Chain A: N.54, A.58, C.83 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eichman, B.F. et al., Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases. Embo J. (2003)

Release Date

2003-10-07

Peptides

3-METHYLADENINE DNA GLYCOSYLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

3-METHYLADENINE DNA GLYCOSYLASE

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