SMTL ID : 1qbs.1

HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x DMP: [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHEN YLMETHYL)]-2H-1,3-DIAZEPINONE(Non-covalent)

DMP.1: 27 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 24 PLIP interactions: 12 interactions with chain A, 12 interactions with chain B Hydrophobic interactions: A:A.28, A:V.32, A:I.47, A:I.50, A:P.81, A:V.82, A:I.84, B:A.28, B:V.32, B:I.50, B:P.81, B:V.82, B:I.84 Hydrogen bonds: A:D.25, A:D.29, A:D.30, A:D.30, A:I.50, B:G.27, B:D.29, B:D.30, B:D.30, B:D.30, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lam, P.Y. et al., Cyclic HIV protease inhibitors: synthesis, conformational analysis, P2/P2' structure-activity relationship, and molecular recognition of cyclic ureas. J.Med.Chem. (1996)

Release Date

1997-10-15

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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