SMTL ID : 1qbt.1

HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x 146: [4R-(4ALPHA,5ALPHA,6ALPHA,7ALPHA)]-3,3'-{{TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-DIYL]BIS(METHYLENE)]BIS[N-1H-BENZIMIDAZOL-2-YLBENZAMIDE](Non-covalent)

146.1: 31 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, V.32, K.45, M.46, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, D.30, V.32, K.45, I.47, G.48, G.49, I.50, P.81, V.82, I.84 31 PLIP interactions: 15 interactions with chain A, 16 interactions with chain B Hydrophobic interactions: A:A.28, A:V.32, A:I.50, A:I.50, A:P.81, A:V.82, A:I.84, A:I.84, B:A.28, B:V.32, B:I.50, B:I.50, B:P.81, B:V.82, B:I.84, B:I.84 Hydrogen bonds: A:G.27, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48, A:I.50, B:D.25, B:D.29, B:D.30, B:D.30, B:G.48, B:G.48, B:G.48, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jadhav, P.K. et al., Cyclic urea amides: HIV-1 protease inhibitors with low nanomolar potency against both wild type and protease inhibitor resistant mutants of HIV. J.Med.Chem. (1997)

Release Date

1997-10-15

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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