SMTL ID : 1qi2.1 (2 other biounits)

ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL CRYSTAL FORM IN COMPLEX WITH 2',4'-DINITROPHENYL 2-DEOXY-2-FLUORO-B-D-CELLOTRIOSIDE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x G2F- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose(Non-functional Binders)

G2F-BGC-BGC.1: 16 residues within 4Å: Chain A: H.35, W.39, Y.40, Y.66, H.101, L.103, N.138, E.139, Y.202, E.228, A.234, T.235, G.236, W.262, K.267, E.269 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.40, A:Y.40, A:H.101, A:Y.202, A:T.235 Halogen bonds: A:N.138

5 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.3: 1 residues within 4Å: Chain A: E.157 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.157, H2O.6, H2O.8, H2O.9, H2O.10 CA.4: 4 residues within 4Å: Chain A: G.127, D.166, N.168, N.169 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.127, A:D.166, H2O.5, H2O.6 CA.5: 2 residues within 4Å: Chain A: D.120, E.124 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.120, A:D.120, A:E.124, H2O.7 CA.6: 1 residues within 4Å: Chain A: N.256 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Varrot, A. et al., Insights into ligand-induced conformational change in Cel5A from Bacillus agaradhaerens revealed by a catalytically active crystal form. J.Mol.Biol. (2000)

Release Date

2000-06-07

Peptides

ENDOGLUCANASE B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDOGLUCANASE B

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