SMTL ID : 1qqp.3 (4 other biounits)

FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-6-6-6-6-mer

Ligands

6 x IDX- SGN- IDS- SGN- IDX: 2-O-sulfo-alpha-L-gulopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-gulopyranuronic acid

IDX-SGN-IDS-SGN-IDX.1: 5 residues within 4Å: Chain A: H.195, T.197 Chain B: K.134, R.135, Y.138 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Salt bridges: A:H.195, B:K.134 Water bridges: B:K.134, B:K.134 IDX-SGN-IDS-SGN-IDX.2: 12 residues within 4Å: Chain C: R.56, F.57, E.58, G.59, G.60, K.84, N.88 Chain E: H.195, T.197 Chain F: K.134, R.135, Y.138 14 PLIP interactions: 1 interactions with chain E, 3 interactions with chain F, 10 interactions with chain C Salt bridges: E:H.195, F:K.134, C:K.84, C:K.84, C:R.56, C:K.84 Water bridges: F:K.134, F:K.134, C:R.56, C:K.84, C:K.84, C:K.84, C:K.84, C:R.56, C:R.56 Hydrogen bonds: C:R.56, C:G.59, C:G.60, C:K.84, C:K.84, C:K.84 IDX-SGN-IDS-SGN-IDX.3: 12 residues within 4Å: Chain I: H.195, T.197 Chain J: K.134, R.135, Y.138 Chain O: R.56, F.57, E.58, G.59, G.60, K.84, N.88 14 PLIP interactions: 3 interactions with chain J, 10 interactions with chain O, 1 interactions with chain I Water bridges: J:K.134, J:K.134, O:R.56, O:K.84, O:K.84, O:K.84, O:K.84, O:R.56, O:R.56 Salt bridges: J:K.134, O:K.84, I:H.195, O:K.84, O:R.56, O:K.84 Hydrogen bonds: O:R.56, O:G.59, O:G.60, O:K.84, O:K.84, O:K.84 IDX-SGN-IDS-SGN-IDX.4: 5 residues within 4Å: Chain M: H.195, T.197 Chain N: K.134, R.135, Y.138 4 PLIP interactions: 1 interactions with chain M, 3 interactions with chain N Salt bridges: M:H.195, N:K.134 Water bridges: N:K.134, N:K.134 IDX-SGN-IDS-SGN-IDX.5: 5 residues within 4Å: Chain Q: H.195, T.197 Chain R: K.134, R.135, Y.138 4 PLIP interactions: 1 interactions with chain Q, 3 interactions with chain R Salt bridges: Q:H.195, R:K.134 Water bridges: R:K.134, R:K.134 IDX-SGN-IDS-SGN-IDX.6: 12 residues within 4Å: Chain S: R.56, F.57, E.58, G.59, G.60, K.84, N.88 Chain U: H.195, T.197 Chain V: K.134, R.135, Y.138 14 PLIP interactions: 10 interactions with chain S, 1 interactions with chain U, 3 interactions with chain V Water bridges: S:R.56, S:K.84, V:K.134, V:K.134, S:K.84, S:K.84, S:K.84, S:R.56, S:R.56 Salt bridges: S:K.84, U:H.195, V:K.134, S:K.84, S:R.56, S:K.84 Hydrogen bonds: S:R.56, S:G.59, S:G.60, S:K.84, S:K.84, S:K.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fry, E.E. et al., The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex. EMBO J. (1999)

Release Date

1999-06-18

Peptides

PROTEIN (GENOME POLYPROTEIN): AEIMQU
PROTEIN (GENOME POLYPROTEIN): BFJNRV
PROTEIN (GENOME POLYPROTEIN): CGKOSW
PROTEIN (GENOME POLYPROTEIN): DHLPTX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

U
1

B
2

F
2

J
2

N
2

R
2

V
2

C
3

G
3

K
3

O
3

S
3

W
3

D
4

H
4

L
4

P
4

T
4

X
4

PROTEIN (GENOME POLYPROTEIN)

PROTEIN (GENOME POLYPROTEIN)

PROTEIN (GENOME POLYPROTEIN)

PROTEIN (GENOME POLYPROTEIN)

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