SMTL ID : 1qw8.1

Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with Ara-alpha(1,3)-Xyl

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-hexamer

Ligands

6 x XYP- AHR: alpha-L-arabinofuranose-(1-3)-beta-D-xylopyranose(Non-covalent)

XYP-AHR.1: 13 residues within 4Å: Chain A: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, N.217, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.29, A:N.74, A:N.174, A:N.174, A:Q.351, A:N.74 Water bridges: A:S.216, A:E.294 XYP-AHR.2: 12 residues within 4Å: Chain B: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.29, B:N.74, B:N.174, B:N.174, B:Y.246, B:Q.351, B:N.74 Water bridges: B:R.69, B:N.74, B:H.244, B:S.216, B:H.244 XYP-AHR.3: 13 residues within 4Å: Chain C: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, N.217, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.29, C:N.74, C:N.174, C:N.174, C:Q.351, C:N.74 Water bridges: C:S.216, C:E.294 XYP-AHR.4: 12 residues within 4Å: Chain D: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:E.29, D:N.74, D:N.174, D:N.174, D:Y.246, D:Q.351, D:N.74 Water bridges: D:R.69, D:N.74, D:H.244, D:S.216, D:H.244 XYP-AHR.5: 13 residues within 4Å: Chain E: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, N.217, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:E.29, E:N.74, E:N.174, E:N.174, E:Q.351, E:N.74 Water bridges: E:S.216, E:E.294 XYP-AHR.6: 12 residues within 4Å: Chain F: F.27, E.29, G.73, N.74, W.99, N.174, W.180, S.216, Y.246, E.294, W.298, Q.351 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:E.29, F:N.74, F:N.174, F:N.174, F:Y.246, F:Q.351, F:N.74 Water bridges: F:R.69, F:N.74, F:H.244, F:S.216, F:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoevel, K. et al., Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase. Embo J. (2003)

Release Date

2003-10-07

Peptides

Alpha-L-arabinofuranosidase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

Alpha-L-arabinofuranosidase

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