SMTL ID : 1qy0.1

Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: E.151 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.151, A:E.151, H2O.5, H2O.6 CD.2: 1 residues within 4Å: Chain A: E.25 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.25, A:E.25

3 x NA: SODIUM ION(Non-functional Binders)

NA.3: 1 residues within 4Å: Chain A: E.42 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.42 NA.4: 2 residues within 4Å: Chain A: Q.148, E.152 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.148, A:E.152, A:E.152 NA.5: 1 residues within 4Å: Chain A: D.137 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.137, A:D.137

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 5 residues within 4Å: Chain A: F.68, M.81, A.115, L.117, Y.132 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.132, A:Y.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bingham, R.J. et al., Thermodynamics of Binding of 2-Methoxy-3-isopropylpyrazine and 2-Methoxy-3-isobutylpyrazine to the Major Urinary Protein. J.Am.Chem.Soc. (2004)

Release Date

2004-02-24

Peptides

Major urinary protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Major urinary protein

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