SMTL ID : 1r1a.2 (4 other biounits)

CRYSTAL STRUCTURE OF HUMAN RHINOVIRUS SEROTYPE 1A (HRV1A)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-5-5-5-5-mer

Ligands

5 x GLC- FRU: beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose(Post Translational Modification)

GLC-FRU.1: 11 residues within 4Å: Chain A: I.101, T.102, L.103, Q.104, Y.193, Y.194, M.195, N.215, M.217, H.241, H.263 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.102, A:L.103, A:Y.194, A:N.215, A:N.215 GLC-FRU.2: 11 residues within 4Å: Chain E: I.101, T.102, L.103, Q.104, Y.193, Y.194, M.195, N.215, M.217, H.241, H.263 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:T.102, E:L.103, E:Y.194, E:N.215, E:N.215 GLC-FRU.3: 11 residues within 4Å: Chain I: I.101, T.102, L.103, Q.104, Y.193, Y.194, M.195, N.215, M.217, H.241, H.263 1 PLIP interactions: 1 interactions with chain I Hydrogen bonds: I:T.102, I:L.103, I:Y.194, I:N.215, I:N.215 GLC-FRU.4: 11 residues within 4Å: Chain M: I.101, T.102, L.103, Q.104, Y.193, Y.194, M.195, N.215, M.217, H.241, H.263 1 PLIP interactions: 1 interactions with chain M Hydrogen bonds: M:T.102, M:L.103, M:Y.194, M:N.215, M:N.215 GLC-FRU.5: 11 residues within 4Å: Chain Q: I.101, T.102, L.103, Q.104, Y.193, Y.194, M.195, N.215, M.217, H.241, H.263 1 PLIP interactions: 1 interactions with chain Q Hydrogen bonds: Q:T.102, Q:L.103, Q:Y.194, Q:N.215, Q:N.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, S.S. et al., Crystal structure of human rhinovirus serotype 1A (HRV1A). J.Mol.Biol. (1989)

Release Date

1990-07-15

Peptides

HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP1): AEIMQ
HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2): BFJNR
HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3): CGKOS
HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP4): DHLPT

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

B
2

F
2

J
2

N
2

R
2

C
3

G
3

K
3

O
3

S
3

D
4

H
4

L
4

P
4

T
4

HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP1)

HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2)

HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3)

HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP4)

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