- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.46 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 6 x FMT: FORMIC ACID(Non-functional Binders)
FMT.3: 5 residues within 4Å:- Chain A: L.94, L.131, R.132, H.133, R.134
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.132, A:H.133, A:R.134
FMT.4: 2 residues within 4Å:- Chain A: R.62, H.63
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.62, A:R.62
FMT.7: 3 residues within 4Å:- Chain B: N.90, Q.93, S.188
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:N.90, B:Q.93, B:S.188
- Water bridges: B:R.96, B:R.96, B:R.96, B:R.96, B:E.192
FMT.10: 5 residues within 4Å:- Chain C: L.94, L.131, R.132, H.133, R.134
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:R.132, C:H.133, C:R.134
FMT.11: 2 residues within 4Å:- Chain C: R.62, H.63
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:R.62, C:R.62
FMT.14: 3 residues within 4Å:- Chain D: N.90, Q.93, S.188
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:N.90, D:Q.93, D:S.188
- Water bridges: D:R.96, D:R.96, D:R.96, D:S.188, D:E.192
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 6 residues within 4Å:- Chain B: G.67, R.69, K.107, Q.109, K.110, R.113
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain A- Water bridges: B:R.69, B:K.107, B:K.110, A:A.10
- Salt bridges: B:R.69, B:K.107, B:K.110, B:R.113
SO4.12: 6 residues within 4Å:- Chain D: G.67, R.69, K.107, Q.109, K.110, R.113
8 PLIP interactions:7 interactions with chain D, 1 interactions with chain C- Water bridges: D:R.69, D:K.107, D:K.110, C:A.10
- Salt bridges: D:R.69, D:K.107, D:K.110, D:R.113
- 2 x SO3: SULFITE ION(Non-covalent)
SO3.6: 4 residues within 4Å:- Chain A: N.35
- Chain B: P.105, G.106, K.107
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:G.106, B:K.107, A:N.35
SO3.13: 4 residues within 4Å:- Chain C: N.35
- Chain D: P.105, G.106, K.107
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:N.35, D:G.106, D:K.107
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Renault, L. et al., Structural snapshots of the mechanism and inhibition of a guanine nucleotide exchange factor. Nature (2003)
- Release Date
- 2004-01-20
- Peptides
- ADP-ribosylation factor 1: AC
Arno: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
ED
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.46 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 6 x FMT: FORMIC ACID(Non-functional Binders)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x SO3: SULFITE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Renault, L. et al., Structural snapshots of the mechanism and inhibition of a guanine nucleotide exchange factor. Nature (2003)
- Release Date
- 2004-01-20
- Peptides
- ADP-ribosylation factor 1: AC
Arno: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
ED
E