SMTL ID : 1rjx.1 (2 other biounits)

Human PLASMINOGEN CATALYTIC DOMAIN, K698M MUTANT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.245, N.246 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.246 Water bridges: A:R.245, A:R.245 Salt bridges: A:R.245 SO4.2: 4 residues within 4Å: Chain A: R.100, Q.177, S.178, T.179 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.178, A:S.178, A:T.179 Water bridges: A:R.235 Salt bridges: A:R.100 SO4.3: 3 residues within 4Å: Chain A: S.92, R.93, K.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.92 Salt bridges: A:R.93, A:K.107 SO4.4: 2 residues within 4Å: Chain A: R.100, R.235 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.235 Water bridges: A:R.235 Salt bridges: A:R.100 SO4.5: 4 residues within 4Å: Chain A: H.27, E.83, K.117 Ligands: SO4.7 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.83 Salt bridges: A:H.27 SO4.6: 3 residues within 4Å: Chain A: R.168, Y.169, E.170 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.169, A:E.170 SO4.7: 3 residues within 4Å: Chain A: P.26, H.27 Ligands: SO4.5 No protein-ligand interaction detected (PLIP) SO4.8: 3 residues within 4Å: Chain A: H.185, L.186, A.187 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.186, A:A.187 Water bridges: A:H.185 Salt bridges: A:H.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Terzyan, S. et al., Characterization of Lys-698 to met substitution in human plasminogen catalytic domain. Proteins (2004)

Release Date

2003-12-02

Peptides

Plasminogen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Plasminogen

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