SMTL ID : 1rjz.2 (1 other biounit)

Mhc Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and Herpies Simplex Virus Mutant Glycoprotein B Peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SER- GLU- ILE- GLU- PHE- ALA- ARG- LEU: Glycoprotein B(Non-covalent)

SER-GLU-ILE-GLU-PHE-ALA-ARG-LEU.1: 30 residues within 4Å: Chain A: L.5, Y.7, V.9, S.24, Y.45, E.63, K.66, A.67, N.70, Q.72, S.73, V.76, D.77, T.80, Y.84, I.95, V.97, S.99, Q.114, Y.116, T.143, K.146, W.147, E.152, R.155, L.156, Y.159, T.163, W.167, Y.171 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:Y.7, A:V.9, A:K.66, A:N.70, A:I.95, A:V.97, A:Y.116, A:Y.116, A:T.143, A:W.147, A:L.156, A:Y.159, A:Y.159 Hydrogen bonds: A:S.24, A:E.63, A:K.66, A:K.66, A:N.70, A:N.70, A:D.77, A:Y.116, A:E.152, A:R.155, A:R.155, A:W.167, A:Y.171 Water bridges: A:Q.72, A:S.73, A:Y.159 Salt bridges: A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miley, M.J. et al., Structural Basis for the Restoration of TCR Recognition of an MHC Allelic Variant by Peptide Secondary Anchor Substitution. J.Exp.Med. (2004)

Release Date

2004-12-14

Peptides

H-2 class I histocompatibility antigen, K-B alpha chain: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

H-2 class I histocompatibility antigen, K-B alpha chain

Beta-2-microglobulin

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