SMTL ID : 1rpt.1

CRYSTAL STRUCTURES OF RAT ACID PHOSPHATASE COMPLEXED WITH THE TRANSITIONS STATE ANALOGS VANADATE AND MOLYBDATE: IMPLICATIONS FOR THE REACTION MECHANISM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 6 residues within 4Å: Chain A: N.272, L.274, P.277, N.301, E.302, Y.308 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 6 residues within 4Å: Chain B: N.272, L.274, P.277, N.301, E.302, Y.308 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: N.62, S.64, K.66 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.62, A:S.64, A:K.66 NAG.5: 3 residues within 4Å: Chain B: N.62, S.64, K.66 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.62, B:S.64, B:K.66

2 x VO4: VANADATE ION(Non-covalent)

VO4.3: 6 residues within 4Å: Chain A: R.11, H.12, R.15, R.79, H.257, D.258 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.15, A:H.257, A:D.258, A:D.258 VO4.6: 6 residues within 4Å: Chain B: R.11, H.12, R.15, R.79, H.257, D.258 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.15, B:H.257, B:D.258, B:D.258, B:D.258

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lindqvist, Y. et al., Crystal structures of rat acid phosphatase complexed with the transition-state analogs vanadate and molybdate. Implications for the reaction mechanism. Eur.J.Biochem. (1994)

Release Date

1994-05-31

Peptides

PROSTATIC ACID PHOSPHATASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROSTATIC ACID PHOSPHATASE

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