SMTL ID : 1rtq.1

The 0.95 Angstrom Resolution Crystal Structure of the Aminopeptidase from Aeromonas proteolytica

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.95 Å

Oligo State

monomer

Ligands

2 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.1: 3 residues within 4Å: Chain A: L.262, A.263, P.267 No protein-ligand interaction detected (PLIP) SCN.2: 4 residues within 4Å: Chain A: A.12, W.13, Q.16, N.135 No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 5 residues within 4Å: Chain A: D.117, E.152, I.255, H.256 Ligands: ZN.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.117, A:E.152, A:H.256, H2O.4, H2O.8 ZN.4: 7 residues within 4Å: Chain A: H.97, D.117, D.118, E.151, E.152, D.179 Ligands: ZN.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.97, A:D.117, A:D.179, A:D.179, H2O.4

3 x NA: SODIUM ION(Non-functional Binders)

NA.5: 2 residues within 4Å: Chain A: T.206, Y.218 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.206 NA.6: 1 residues within 4Å: Chain A: S.51 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.51 Water bridges: A:S.51 NA.7: 2 residues within 4Å: Chain A: T.268, S.270 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.268, A:S.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Desmarais, W. et al., The high-resolution structures of the neutral and the low pH crystals of aminopeptidase from Aeromonas proteolytica. J.Biol.Inorg.Chem. (2006)

Release Date

2004-02-10

Peptides

Bacterial leucyl aminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bacterial leucyl aminopeptidase

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