- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x PO4: PHOSPHATE ION(Non-functional Binders)
- 60 x INI: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE(Non-covalent)
INI.31: 15 residues within 4Å:- Chain A: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain E: I.112, F.113, K.135
7 PLIP interactions:2 interactions with chain E, 5 interactions with chain A- Hydrogen bonds: E:F.113, E:K.135, A:N.23, A:A.56, A:F.57, A:T.80, A:I.82
INI.32: 15 residues within 4Å:- Chain A: I.112, F.113, K.135
- Chain B: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:N.23, B:A.56, B:F.57, B:T.80, B:I.82, A:F.113, A:K.135
INI.33: 15 residues within 4Å:- Chain B: I.112, F.113, K.135
- Chain C: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:N.23, C:A.56, C:F.57, C:T.80, C:I.82, B:F.113, B:K.135
INI.34: 15 residues within 4Å:- Chain C: I.112, F.113, K.135
- Chain D: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:N.23, D:A.56, D:F.57, D:T.80, D:I.82, C:F.113, C:K.135
INI.35: 15 residues within 4Å:- Chain D: I.112, F.113, K.135
- Chain E: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain E, 2 interactions with chain D- Hydrogen bonds: E:N.23, E:A.56, E:F.57, E:T.80, E:I.82, D:F.113, D:K.135
INI.36: 15 residues within 4Å:- Chain F: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain J: I.112, F.113, K.135
7 PLIP interactions:5 interactions with chain F, 2 interactions with chain J- Hydrogen bonds: F:N.23, F:A.56, F:F.57, F:T.80, F:I.82, J:F.113, J:K.135
INI.37: 15 residues within 4Å:- Chain F: I.112, F.113, K.135
- Chain G: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain G, 2 interactions with chain F- Hydrogen bonds: G:N.23, G:A.56, G:F.57, G:T.80, G:I.82, F:F.113, F:K.135
INI.38: 15 residues within 4Å:- Chain G: I.112, F.113, K.135
- Chain H: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain G, 5 interactions with chain H- Hydrogen bonds: G:F.113, G:K.135, H:N.23, H:A.56, H:F.57, H:T.80, H:I.82
INI.39: 15 residues within 4Å:- Chain H: I.112, F.113, K.135
- Chain I: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain I, 2 interactions with chain H- Hydrogen bonds: I:N.23, I:A.56, I:F.57, I:T.80, I:I.82, H:F.113, H:K.135
INI.40: 15 residues within 4Å:- Chain I: I.112, F.113, K.135
- Chain J: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain I, 5 interactions with chain J- Hydrogen bonds: I:F.113, I:K.135, J:N.23, J:A.56, J:F.57, J:T.80, J:I.82
INI.41: 15 residues within 4Å:- Chain K: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain O: I.112, F.113, K.135
6 PLIP interactions:5 interactions with chain K, 1 interactions with chain O- Hydrogen bonds: K:N.23, K:A.56, K:F.57, K:T.80, K:I.82, O:F.113
INI.42: 15 residues within 4Å:- Chain K: I.112, F.113, K.135
- Chain L: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain K, 5 interactions with chain L- Hydrogen bonds: K:F.113, K:K.135, L:N.23, L:A.56, L:F.57, L:T.80, L:I.82
INI.43: 15 residues within 4Å:- Chain L: I.112, F.113, K.135
- Chain M: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain M, 2 interactions with chain L- Hydrogen bonds: M:N.23, M:A.56, M:F.57, M:T.80, M:I.82, L:F.113, L:K.135
INI.44: 15 residues within 4Å:- Chain M: I.112, F.113, K.135
- Chain N: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain M, 5 interactions with chain N- Hydrogen bonds: M:F.113, M:K.135, N:N.23, N:A.56, N:F.57, N:T.80, N:I.82
INI.45: 15 residues within 4Å:- Chain N: I.112, F.113, K.135
- Chain O: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain O, 2 interactions with chain N- Hydrogen bonds: O:N.23, O:A.56, O:F.57, O:T.80, O:I.82, N:F.113, N:K.135
INI.46: 15 residues within 4Å:- Chain P: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain T: I.112, F.113, K.135
7 PLIP interactions:5 interactions with chain P, 2 interactions with chain T- Hydrogen bonds: P:N.23, P:A.56, P:F.57, P:T.80, P:I.82, T:F.113, T:K.135
INI.47: 15 residues within 4Å:- Chain P: I.112, F.113, K.135
- Chain Q: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain Q, 2 interactions with chain P- Hydrogen bonds: Q:N.23, Q:A.56, Q:F.57, Q:T.80, Q:I.82, P:F.113, P:K.135
INI.48: 15 residues within 4Å:- Chain Q: I.112, F.113, K.135
- Chain R: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain R, 2 interactions with chain Q- Hydrogen bonds: R:N.23, R:A.56, R:F.57, R:T.80, R:I.82, Q:F.113, Q:K.135
INI.49: 15 residues within 4Å:- Chain R: I.112, F.113, K.135
- Chain S: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain R, 5 interactions with chain S- Hydrogen bonds: R:F.113, R:K.135, S:N.23, S:A.56, S:F.57, S:T.80, S:I.82
INI.50: 15 residues within 4Å:- Chain S: I.112, F.113, K.135
- Chain T: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain T, 2 interactions with chain S- Hydrogen bonds: T:N.23, T:A.56, T:F.57, T:T.80, T:I.82, S:F.113, S:K.135
INI.51: 15 residues within 4Å:- Chain U: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain Y: I.112, F.113, K.135
7 PLIP interactions:2 interactions with chain Y, 5 interactions with chain U- Hydrogen bonds: Y:F.113, Y:K.135, U:N.23, U:A.56, U:F.57, U:T.80, U:I.82
INI.52: 15 residues within 4Å:- Chain U: I.112, F.113, K.135
- Chain V: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain V, 2 interactions with chain U- Hydrogen bonds: V:N.23, V:A.56, V:F.57, V:T.80, V:I.82, U:F.113, U:K.135
INI.53: 15 residues within 4Å:- Chain V: I.112, F.113, K.135
- Chain W: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
8 PLIP interactions:5 interactions with chain W, 3 interactions with chain V- Hydrogen bonds: W:N.23, W:A.56, W:F.57, W:T.80, W:I.82, V:F.113, V:K.135, V:K.135
INI.54: 15 residues within 4Å:- Chain W: I.112, F.113, K.135
- Chain X: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain X, 2 interactions with chain W- Hydrogen bonds: X:N.23, X:A.56, X:F.57, X:T.80, X:I.82, W:F.113, W:K.135
INI.55: 15 residues within 4Å:- Chain X: I.112, F.113, K.135
- Chain Y: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain X, 5 interactions with chain Y- Hydrogen bonds: X:F.113, X:K.135, Y:N.23, Y:A.56, Y:F.57, Y:T.80, Y:I.82
INI.56: 15 residues within 4Å:- Chain 3: I.112, F.113, K.135
- Chain Z: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain Z, 2 interactions with chain 3- Hydrogen bonds: Z:N.23, Z:A.56, Z:F.57, Z:T.80, Z:I.82, 3:F.113, 3:K.135
INI.57: 15 residues within 4Å:- Chain 0: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain Z: I.112, F.113, K.135
7 PLIP interactions:5 interactions with chain 0, 2 interactions with chain Z- Hydrogen bonds: 0:N.23, 0:A.56, 0:F.57, 0:T.80, 0:I.82, Z:F.113, Z:K.135
INI.58: 15 residues within 4Å:- Chain 0: I.112, F.113, K.135
- Chain 1: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
6 PLIP interactions:5 interactions with chain 1, 1 interactions with chain 0- Hydrogen bonds: 1:N.23, 1:A.56, 1:F.57, 1:T.80, 1:I.82, 0:F.113
INI.59: 15 residues within 4Å:- Chain 1: I.112, F.113, K.135
- Chain 2: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain 2, 2 interactions with chain 1- Hydrogen bonds: 2:N.23, 2:A.56, 2:F.57, 2:T.80, 2:I.82, 1:F.113, 1:K.135
INI.60: 15 residues within 4Å:- Chain 2: I.112, F.113, K.135
- Chain 3: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain 2, 5 interactions with chain 3- Hydrogen bonds: 2:F.113, 2:K.135, 3:N.23, 3:A.56, 3:F.57, 3:T.80, 3:I.82
INI.91: 15 residues within 4Å:- Chain 4: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
- Chain 8: I.112, F.113, K.135
7 PLIP interactions:5 interactions with chain 4, 2 interactions with chain 8- Hydrogen bonds: 4:N.23, 4:A.56, 4:F.57, 4:T.80, 4:I.82, 8:F.113, 8:K.135
INI.92: 15 residues within 4Å:- Chain 4: I.112, F.113, K.135
- Chain 5: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:2 interactions with chain 4, 5 interactions with chain 5- Hydrogen bonds: 4:F.113, 4:K.135, 5:N.23, 5:A.56, 5:F.57, 5:T.80, 5:I.82
INI.93: 15 residues within 4Å:- Chain 5: I.112, F.113, K.135
- Chain 6: F.22, N.23, P.54, G.55, A.56, F.57, E.58, T.80, V.81, I.82, H.88, V.92
7 PLIP interactions:5 interactions with chain 6, 2 interactions with chain 5- Hydrogen bonds: 6:N.23, 6:A.56, 6:F.57, 6:T.80, 6:I.82, 5:F.113, 5:K.135
INI.94: 15 residues within 4Å:- Chain 6: I.112, F.113, K.135
- Chain 7: F.22, N.23, P.54, G.55, A.56, F.57, E.58,
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x PO4: PHOSPHATE ION(Non-functional Binders)
- 60 x INI: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE(Non-covalent)