- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 4 x HEC: HEME C(Covalent)
HEC.2: 23 residues within 4Å:- Chain A: I.49, S.50, C.51, C.54, H.55, S.68, I.69, R.78, N.79, S.80, P.81, A.86, N.89, Q.92, F.93, W.94, P.108, V.109, G.112, V.113, I.156, E.160, R.246
17 PLIP interactions:16 interactions with chain A, 1 Ligand-Water interactions- Hydrophobic interactions: A:I.49, A:I.69, A:P.81, A:A.86, A:P.108, A:P.108, A:V.109, A:V.113, A:I.156
- Hydrogen bonds: A:N.89, A:W.94
- Water bridges: A:N.89, A:D.95, A:R.246
- Salt bridges: A:R.246
- Metal complexes: A:H.55, H2O.3
HEC.3: 24 residues within 4Å:- Chain A: W.94, G.196, C.197, C.200, H.201, Y.212, F.214, G.215, L.216, F.245, R.246, A.247, S.248, L.250, I.253, Y.259, F.260, H.261, A.271, V.272, M.275, T.282, L.284, I.292
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:Y.212, A:F.214, A:F.245, A:A.247, A:I.253, A:F.260, A:F.260, A:A.271, A:V.272, A:L.284, A:I.292
- Hydrogen bonds: A:L.216, A:S.248, A:F.260, A:H.261
- Salt bridges: A:H.261
- Metal complexes: A:H.201
HEC.5: 23 residues within 4Å:- Chain B: I.49, S.50, C.51, C.54, H.55, S.68, I.69, R.78, N.79, S.80, P.81, A.86, N.89, Q.92, F.93, W.94, P.108, V.109, G.112, V.113, I.156, E.160, R.246
17 PLIP interactions:16 interactions with chain B, 1 Ligand-Water interactions- Hydrophobic interactions: B:I.49, B:I.69, B:P.81, B:A.86, B:P.108, B:P.108, B:V.109, B:V.113, B:I.156
- Hydrogen bonds: B:N.89, B:W.94
- Water bridges: B:N.89, B:D.95, B:R.246
- Salt bridges: B:R.246
- Metal complexes: B:H.55, H2O.14
HEC.6: 24 residues within 4Å:- Chain B: W.94, G.196, C.197, C.200, H.201, Y.212, F.214, G.215, L.216, F.245, R.246, A.247, S.248, L.250, I.253, Y.259, F.260, H.261, A.271, V.272, M.275, T.282, L.284, I.292
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:Y.212, B:F.214, B:F.245, B:A.247, B:I.253, B:F.260, B:F.260, B:A.271, B:V.272, B:L.284, B:I.292
- Hydrogen bonds: B:L.216, B:S.248, B:F.260, B:H.261
- Salt bridges: B:H.261
- Metal complexes: B:H.201
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dias, J.M. et al., Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617. Structure (2004)
- Release Date
- 2004-06-29
- Peptides
- Cytochrome c peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 4 x HEC: HEME C(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dias, J.M. et al., Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617. Structure (2004)
- Release Date
- 2004-06-29
- Peptides
- Cytochrome c peroxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A