SMTL ID : 1sby.1

Alcohol dehydrogenase from Drosophila lebanonensis complexed with NAD+ and 2,2,2-trifluoroethanol at 1.1 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 28 residues within 4Å: Chain A: A.12, G.15, G.16, I.17, D.37, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, I.106, I.136, C.137, S.138, Y.151, K.155, P.181, G.182, I.183, T.184, T.186, P.187, L.188, V.189 Ligands: ETF.2 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:I.17, A:P.181, A:L.188 Hydrogen bonds: A:A.12, A:L.14, A:G.15, A:G.16, A:I.17, A:D.63, A:V.64, A:G.91, A:G.93, A:R.102, A:Y.151, A:K.155, A:T.184, A:T.184, A:T.184, A:L.188 Water bridges: A:G.18, A:D.37, A:R.38 NAD.3: 27 residues within 4Å: Chain B: A.12, G.15, G.16, I.17, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, I.106, I.136, C.137, S.138, Y.151, K.155, P.181, G.182, I.183, T.184, T.186, P.187, L.188, V.189 Ligands: ETF.4 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:I.17, B:P.181 Hydrogen bonds: B:A.12, B:G.15, B:G.16, B:I.17, B:R.38, B:D.63, B:D.63, B:V.64, B:G.91, B:G.93, B:Y.151, B:K.155, B:T.184, B:T.186, B:T.186 Water bridges: B:G.18

2 x ETF: TRIFLUOROETHANOL(Non-covalent)

ETF.2: 9 residues within 4Å: Chain A: L.95, S.138, T.140, I.145, Y.151, I.183, L.188, V.189 Ligands: NAD.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.138, A:S.138 ETF.4: 9 residues within 4Å: Chain B: L.95, S.138, T.140, I.145, Y.151, I.183, L.188, V.189 Ligands: NAD.3 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.138, B:S.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benach, J. et al., 1.1-A crystal structure of D. lebanonensis ADH complexed with NAD+ and 2,2,2-trifluoroethanol. To be Published

Release Date

2005-02-22

Peptides

Alcohol dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Alcohol dehydrogenase

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