SMTL ID : 1sdy.1

STRUCTURE SOLUTION AND MOLECULAR DYNAMICS REFINEMENT OF THE YEAST CU,ZN ENZYME SUPEROXIDE DISMUTASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: H.46, H.48, H.63, H.120 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.46, A:H.48, A:H.63, A:H.120, H2O.1 CU.3: 4 residues within 4Å: Chain B: H.46, H.48, H.63, H.120 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.46, B:H.48, B:H.63, B:H.120, H2O.6 CU.5: 4 residues within 4Å: Chain C: H.46, H.48, H.63, H.120 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.46, C:H.48, C:H.63, C:H.120, H2O.10 CU.7: 4 residues within 4Å: Chain D: H.46, H.48, H.63, H.120 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.46, D:H.48, D:H.63, D:H.120, H2O.15

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.63, H.71, H.80, D.83, K.136 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.63, A:H.71, A:H.80, A:D.83, A:D.83 ZN.4: 5 residues within 4Å: Chain B: H.63, H.71, H.80, D.83, K.136 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.63, B:H.71, B:H.80, B:D.83 ZN.6: 5 residues within 4Å: Chain C: H.63, H.71, H.80, D.83, K.136 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.63, C:H.71, C:H.80, C:D.83 ZN.8: 5 residues within 4Å: Chain D: H.63, H.71, H.80, D.83, K.136 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:H.63, D:H.71, D:H.80, D:D.83, D:D.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Djinovic, K. et al., Structure solution and molecular dynamics refinement of the yeast Cu,Zn enzyme superoxide dismutase. Acta Crystallogr.,Sect.B (1991)

Release Date

1994-01-31

Peptides

COPPER,ZINC SUPEROXIDE DISMUTASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

COPPER,ZINC SUPEROXIDE DISMUTASE

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