SMTL ID : 1sh9.1

Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x RIT: RITONAVIR(Non-covalent)

RIT.1: 20 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, I.32, I.47, G.48, G.49, I.50, P.81 Chain B: D.25, G.27, D.30, I.32, I.47, G.48, G.49, I.50, P.81, A.82 17 PLIP interactions: 9 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:I.50, B:I.50, B:P.81, B:A.82, A:A.28, A:I.32, A:I.47, A:I.50, A:P.81 Hydrogen bonds: B:D.25, B:G.27, B:D.30, A:G.27, A:D.29, A:G.48 Water bridges: B:I.50, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clemente, J.C. et al., Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease. Biochemistry (2004)

Release Date

2004-10-05

Peptides

POL polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL polyprotein

Related Entries With Identical Sequence