SMTL ID : 1swd.1

APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN (TWO UNOCCUPIED BINDING SITES) AT PH 4.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

2 x BTN: BIOTIN(Non-covalent)

BTN.1: 17 residues within 4Å: Chain A: N.11, L.13, S.15, Y.31, S.33, V.35, G.36, N.37, W.67, A.74, S.76, T.78, W.80, W.96, L.98, D.116 Chain D: W.108 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain D Hydrophobic interactions: A:W.67, A:W.67, A:W.67, A:L.98, D:W.108 Hydrogen bonds: A:N.11, A:S.15, A:S.33, A:S.33, A:N.37, A:S.76, A:S.76, A:D.116 BTN.2: 17 residues within 4Å: Chain A: W.108 Chain D: N.11, L.13, S.15, Y.31, S.33, V.35, G.36, N.37, W.67, A.74, S.76, T.78, W.80, W.96, L.98, D.116 12 PLIP interactions: 11 interactions with chain D, 1 interactions with chain A Hydrophobic interactions: D:V.35, D:W.67, D:W.67, D:L.98, A:W.108 Hydrogen bonds: D:N.11, D:S.15, D:S.15, D:N.37, D:S.76, D:S.76, D:D.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freitag, S. et al., Structural studies of the streptavidin binding loop. Protein Sci. (1997)

Release Date

1998-03-04

Peptides

STREPTAVIDIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

STREPTAVIDIN

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