- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 3 x K: POTASSIUM ION(Non-covalent)
K.3: 6 residues within 4Å:- Chain A: E.52, I.72, S.76
- Chain B: E.52, I.72, S.76
No protein-ligand interaction detected (PLIP)K.8: 6 residues within 4Å:- Chain C: E.52, I.72, S.76
- Chain D: E.52, I.72, S.76
No protein-ligand interaction detected (PLIP)K.13: 6 residues within 4Å:- Chain E: E.52, I.72, S.76
- Chain F: E.52, I.72, S.76
No protein-ligand interaction detected (PLIP)- 6 x 5UD: 5-FLUOROURIDINE(Non-covalent)
5UD.4: 17 residues within 4Å:- Chain A: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Chain B: F.10, H.11
- Ligands: SO4.1
11 PLIP interactions:8 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:R.94, A:T.97, A:Q.169, A:Q.169, A:R.171, A:R.171, A:M.200, A:E.201, B:H.11
- Water bridges: B:R.51, B:R.51
5UD.5: 17 residues within 4Å:- Chain A: F.10, H.11
- Chain B: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Ligands: SO4.2
12 PLIP interactions:9 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:R.94, B:T.97, B:Q.169, B:Q.169, B:R.171, B:R.171, B:E.199, B:M.200, B:E.201, A:H.11
- Water bridges: A:R.51, A:R.51
5UD.9: 17 residues within 4Å:- Chain C: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Chain D: F.10, H.11
- Ligands: SO4.6
11 PLIP interactions:8 interactions with chain C, 3 interactions with chain D- Hydrogen bonds: C:R.94, C:T.97, C:Q.169, C:Q.169, C:R.171, C:R.171, C:M.200, C:E.201, D:H.11
- Water bridges: D:R.51, D:R.51
5UD.10: 17 residues within 4Å:- Chain C: F.10, H.11
- Chain D: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Ligands: SO4.7
12 PLIP interactions:9 interactions with chain D, 3 interactions with chain C- Hydrogen bonds: D:R.94, D:T.97, D:Q.169, D:Q.169, D:R.171, D:R.171, D:E.199, D:M.200, D:E.201, C:H.11
- Water bridges: C:R.51, C:R.51
5UD.14: 17 residues within 4Å:- Chain E: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Chain F: F.10, H.11
- Ligands: SO4.11
11 PLIP interactions:8 interactions with chain E, 3 interactions with chain F- Hydrogen bonds: E:R.94, E:T.97, E:Q.169, E:Q.169, E:R.171, E:R.171, E:M.200, E:E.201, F:H.11
- Water bridges: F:R.51, F:R.51
5UD.15: 17 residues within 4Å:- Chain E: F.10, H.11
- Chain F: I.72, R.94, T.97, T.98, G.99, F.165, Q.169, R.171, Y.198, E.199, M.200, E.201, I.223, V.224
- Ligands: SO4.12
12 PLIP interactions:9 interactions with chain F, 3 interactions with chain E- Hydrogen bonds: F:R.94, F:T.97, F:Q.169, F:Q.169, F:R.171, F:R.171, F:E.199, F:M.200, F:E.201, E:H.11
- Water bridges: E:R.51, E:R.51
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bu, W. et al., Structures of E. coli Uridine Phosphorylase. To be Published (2004)
- Release Date
- 2005-06-14
- Peptides
- uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 3 x K: POTASSIUM ION(Non-covalent)
- 6 x 5UD: 5-FLUOROURIDINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bu, W. et al., Structures of E. coli Uridine Phosphorylase. To be Published (2004)
- Release Date
- 2005-06-14
- Peptides
- uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B