- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-oligomer
- Ligands
- 3 x FE2: FE (II) ION(Non-covalent)
- 3 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.4: 10 residues within 4Å:- Chain A: C.98, H.100, R.101, G.102, M.103, C.118, Y.120, H.121, G.122, W.123
4 PLIP interactions:4 interactions with chain A,- Metal complexes: A:C.98, A:H.100, A:C.118, A:H.121
FES.5: 10 residues within 4Å:- Chain C: C.98, H.100, R.101, G.102, M.103, C.118, Y.120, H.121, G.122, W.123
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.98, C:H.100, C:C.118, C:H.121
FES.6: 10 residues within 4Å:- Chain E: C.98, H.100, R.101, G.102, M.103, C.118, Y.120, H.121, G.122, W.123
4 PLIP interactions:4 interactions with chain E,- Metal complexes: E:C.98, E:H.100, E:C.118, E:H.121
- 3 x BNL: BIPHENYL(Non-covalent)
BNL.7: 14 residues within 4Å:- Chain A: Q.217, F.218, D.221, M.222, H.224, A.225, H.230, L.274, I.278, A.311, H.313, L.323, F.368, F.374
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:A.225, A:L.274, A:I.278, A:A.311, A:H.313, A:L.323, A:F.368, A:F.368, A:F.374
- pi-Stacking: A:F.218, A:H.224
BNL.8: 12 residues within 4Å:- Chain C: Q.217, F.218, D.221, M.222, H.224, A.225, H.230, I.278, H.313, F.368, F.374
- Ligands: FE2.2
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:A.225, C:I.278, C:H.313, C:F.374
- pi-Stacking: C:F.218, C:H.224, C:F.368
BNL.9: 13 residues within 4Å:- Chain E: Q.217, F.218, D.221, M.222, H.224, A.225, H.230, I.278, A.311, H.313, L.323, F.368, F.374
9 PLIP interactions:9 interactions with chain E- Hydrophobic interactions: E:A.225, E:I.278, E:A.311, E:H.313, E:L.323, E:F.368, E:F.374
- pi-Stacking: E:F.218, E:H.224
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Furusawa, Y. et al., Crystal Structure of the Terminal Oxygenase Component of Biphenyl Dioxygenase Derived from Rhodococcus sp. Strain RHA1. J.Mol.Biol. (2004)
- Release Date
- 2004-09-28
- Peptides
- biphenyl dioxygenase large subunit: ACE
biphenyl dioxygenase small subunit: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-oligomer
- Ligands
- 3 x FE2: FE (II) ION(Non-covalent)
- 3 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 3 x BNL: BIPHENYL(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Furusawa, Y. et al., Crystal Structure of the Terminal Oxygenase Component of Biphenyl Dioxygenase Derived from Rhodococcus sp. Strain RHA1. J.Mol.Biol. (2004)
- Release Date
- 2004-09-28
- Peptides
- biphenyl dioxygenase large subunit: ACE
biphenyl dioxygenase small subunit: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F