SMTL ID : 1uyx.2 (1 other biounit)

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with cellobiose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

2 x BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.1: 12 residues within 4Å: Chain A: Q.13, W.39, L.40, S.41, A.43, E.73, E.74, A.75, G.76, G.77, G.112, K.114 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.76, A:G.77, A:K.114, A:K.114 Water bridges: A:W.39, A:K.114 BGC-BGC.2: 5 residues within 4Å: Chain A: E.20, G.32, Y.33, W.92, N.121 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.20, A:Y.33, A:N.121 Water bridges: A:Y.33, A:Y.33, A:I.34, A:I.34, A:W.120

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: G.16, Y.33, D.35, D.38 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.16, A:Y.33, A:D.35, A:D.38, H2O.4 CA.4: 4 residues within 4Å: Chain A: Q.7, E.9, K.29, N.123 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.9, A:K.29, A:N.123, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pires, V.M.R. et al., The Crystal Structure of the Family 6 Carbohydrate Binding Module from Cellvibrio Mixtus Endoglucanase 5A in Complex with Oligosaccharides Reveals Two Distinct Binding Sites with Different Ligand Specificities. J.Biol.Chem. (2004)

Release Date

2004-03-11

Peptides

CELLULASE B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CELLULASE B

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