- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
NAG.2: 10 residues within 4Å:- Chain A: R.343, R.349, D.350, W.490, N.491, D.492, E.637, F.642, Q.690
- Ligands: NDG.1
12 PLIP interactions:11 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.343, A:R.343, A:R.349, A:R.349, A:D.350, A:D.492, A:Q.690
- Water bridges: A:R.333, A:R.333, A:D.350, B:Q.168
- Salt bridges: A:K.636
NAG.8: 10 residues within 4Å:- Chain B: R.343, R.349, D.350, W.490, N.491, D.492, E.637, F.642, Q.690
- Ligands: NDG.7
16 PLIP interactions:15 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.343, B:R.343, B:R.349, B:R.349, B:D.350, B:D.492, B:D.492, B:E.637, B:Q.690
- Water bridges: B:R.333, B:R.333, B:D.350, B:D.350, B:D.350, A:Q.168
- Salt bridges: B:K.636
- 6 x CA: CALCIUM ION(Non-covalent)
CA.3: 5 residues within 4Å:- Chain A: D.186, L.187, N.190, G.196, F.197
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.186, A:L.187, A:N.190, A:G.196, H2O.17
CA.4: 2 residues within 4Å:- Chain A: G.791, D.793
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:G.791, A:D.793, H2O.1, H2O.8, H2O.10
CA.5: 1 residues within 4Å:- Chain A: T.140
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:T.140, H2O.9, H2O.13, H2O.14, H2O.15
CA.9: 5 residues within 4Å:- Chain B: D.186, L.187, N.190, G.196, F.197
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.186, B:L.187, B:N.190, B:G.196, H2O.52
CA.10: 2 residues within 4Å:- Chain B: G.791, D.793
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:G.791, B:D.793, H2O.36, H2O.43, H2O.45
CA.11: 1 residues within 4Å:- Chain B: T.140
5 PLIP interactions:1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:T.140, H2O.44, H2O.48, H2O.49, H2O.50
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hidaka, M. et al., Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. Structure (2004)
- Release Date
- 2004-06-22
- Peptides
- chitobiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hidaka, M. et al., Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. Structure (2004)
- Release Date
- 2004-06-22
- Peptides
- chitobiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A