- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
NAG.2: 11 residues within 4Å:- Chain A: R.343, R.349, D.350, W.490, N.491, D.492, E.637, F.642, Q.690
- Ligands: NDG.1, SO4.5
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:R.343, A:R.343, A:R.349, A:R.349, A:D.350, A:D.492, A:Q.690
- Water bridges: A:R.333, A:R.333
- Salt bridges: A:K.636
NAG.7: 11 residues within 4Å:- Chain B: R.343, R.349, D.350, W.490, N.491, D.492, E.637, F.642, Q.690
- Ligands: NDG.6, SO4.10
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:R.343, B:R.343, B:R.349, B:R.349, B:D.350, B:D.492, B:D.492, B:E.637, B:Q.690
- Water bridges: B:R.333, B:R.333, B:D.350, B:D.350
- Salt bridges: B:K.636
- 4 x CA: CALCIUM ION(Non-covalent)
CA.3: 5 residues within 4Å:- Chain A: D.186, L.187, N.190, G.196, F.197
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.186, A:L.187, A:N.190, A:G.196, H2O.11
CA.4: 2 residues within 4Å:- Chain A: G.791, D.793
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:G.791, A:D.793, H2O.5, H2O.13
CA.8: 5 residues within 4Å:- Chain B: D.186, L.187, N.190, G.196, F.197
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.186, B:L.187, B:N.190, B:G.196, H2O.32
CA.9: 2 residues within 4Å:- Chain B: G.791, D.793
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:G.791, B:D.793, H2O.26, H2O.34
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 7 residues within 4Å:- Chain A: R.333, F.642, H.644, Q.690, T.709, G.710
- Ligands: NAG.2
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:Q.690, A:G.710
- Water bridges: A:R.333, A:R.333, A:R.333, A:L.708, A:T.709, A:T.711
- Salt bridges: A:R.333, A:H.644
SO4.10: 7 residues within 4Å:- Chain B: R.333, F.642, H.644, Q.690, T.709, G.710
- Ligands: NAG.7
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:Q.690, B:T.709, B:G.710
- Water bridges: B:R.333, B:R.333, B:R.333, B:L.708
- Salt bridges: B:R.333, B:H.644
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hidaka, M. et al., Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. Structure (2004)
- Release Date
- 2004-06-22
- Peptides
- chitobiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hidaka, M. et al., Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. Structure (2004)
- Release Date
- 2004-06-22
- Peptides
- chitobiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A