SMTL ID : 1vm0.1

X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT2G34160

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x K: POTASSIUM ION(Non-covalent)

K.1: 4 residues within 4Å: Chain A: K.19, K.20, R.22, Y.42 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:K.19, A:R.22, A:Y.42, H2O.1 K.3: 2 residues within 4Å: Chain B: E.120, E.122 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.120, B:E.120, B:E.122, H2O.4 K.7: 4 residues within 4Å: Chain C: K.19, K.20, R.22, Y.42 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:K.19, C:R.22, C:Y.42, H2O.7 K.9: 2 residues within 4Å: Chain D: E.120, E.122 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.120, D:E.120, D:E.122, H2O.11

8 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 6 residues within 4Å: Chain A: V.36, K.40, I.67, N.71, F.73 Chain D: F.33 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.40, A:K.40 NO3.4: 7 residues within 4Å: Chain B: P.31, L.32, F.33 Chain C: E.66, I.67, N.70, N.71 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:N.70, C:N.71, B:F.33 Water bridges: C:E.66, B:L.32 NO3.5: 7 residues within 4Å: Chain B: E.66, I.67, N.70, N.71 Chain C: P.31, L.32, F.33 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:N.70, B:N.71, C:F.33 Water bridges: C:L.32, C:L.32 NO3.6: 6 residues within 4Å: Chain B: V.36, K.40, I.67, N.71, F.73 Chain C: F.33 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.40, B:K.40, B:N.71 NO3.8: 6 residues within 4Å: Chain B: F.33 Chain C: V.36, K.40, I.67, N.71, F.73 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.40, C:K.40 NO3.10: 7 residues within 4Å: Chain A: E.66, I.67, N.70, N.71 Chain D: P.31, L.32, F.33 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain A Hydrogen bonds: D:F.33, A:N.70, A:N.71 Water bridges: D:L.32, A:E.66 NO3.11: 7 residues within 4Å: Chain A: P.31, L.32, F.33 Chain D: E.66, I.67, N.70, N.71 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain A Hydrogen bonds: D:N.70, D:N.71, A:F.33 Water bridges: A:L.32, A:L.32 NO3.12: 6 residues within 4Å: Chain A: F.33 Chain D: V.36, K.40, I.67, N.71, F.73 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:K.40, D:K.40, D:N.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Center for Eukaryotic Structural Genomics, X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT2G34160. To be published

Release Date

2004-08-31

Peptides

unknown protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

unknown protein

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