SMTL ID : 1vsv.3 (4 other biounits)

Crystal Structure of holo-glyceraldehyde 3-phosphate dehydrogenase from Cryptosporidium parvum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 23 residues within 4Å: Chain A: N.28, G.29, F.30, G.31, R.32, I.33, N.53, D.54, P.55, F.56, M.57, K.99, S.117, T.118, G.119, F.121, S.141, A.142, C.173, A.204, N.339, E.340, Y.343 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:I.33, A:Y.343 Hydrogen bonds: A:N.28, A:F.30, A:F.30, A:R.32, A:I.33, A:N.53, A:K.99, A:N.339 Water bridges: A:G.31, A:G.34, A:G.119, A:S.141, A:A.204, A:A.204 NAD.2: 25 residues within 4Å: Chain B: N.28, G.29, F.30, G.31, R.32, I.33, N.53, D.54, P.55, F.56, M.57, A.98, K.99, S.117, T.118, G.119, F.121, S.141, A.142, C.173, T.203, A.204, N.339, E.340, Y.343 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.33, B:Y.343 Hydrogen bonds: B:N.28, B:F.30, B:R.32, B:I.33, B:N.53, B:K.99, B:N.339 Water bridges: B:G.31, B:G.34, B:G.119, B:S.141, B:A.204, B:N.205, B:E.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cook, W.J. et al., An unexpected phosphate binding site in Glyceraldehyde 3-Phosphate Dehydrogenase: Crystal structures of apo, holo and ternary complex of Cryptosporidium parvum enzyme. BMC STRUCT.BIOL. (2009)

Release Date

2009-03-24

Peptides

Glyceraldehyde-3-phosphate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Glyceraldehyde-3-phosphate dehydrogenase

Related Entries With Identical Sequence