SMTL ID : 1w3l.1

ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN COMPLEX WITH CELLOTRI DERIVED-TETRAHYDROOXAZINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.04 Å

Oligo State

monomer

Ligands

1 x BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.1: 11 residues within 4Å: Chain A: H.35, W.39, Y.40, Y.66, L.103, T.235, G.236, W.262, K.267, E.269 Ligands: OXZ.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.40 Water bridges: A:W.39

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: K.152, E.156, Q.189 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.152, A:E.156 Water bridges: A:K.152, A:K.152, A:N.188, A:N.188, A:A.191 GOL.3: 6 residues within 4Å: Chain A: T.146, W.147, G.148, N.149, H.184, N.188 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.146, A:T.146, A:G.148, A:N.149, A:N.149, A:N.188 Water bridges: A:W.147

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 1 residues within 4Å: Chain A: R.53 8 PLIP interactions: 8 interactions with chain A Water bridges: A:Y.46, A:Y.46, A:K.50, A:R.53, A:R.53, A:R.53 Salt bridges: A:K.50, A:R.53

1 x OXZ: TETRAHYDROOXAZINE(Non-covalent)

OXZ.5: 12 residues within 4Å: Chain A: Y.66, H.101, L.103, N.138, E.139, Y.202, E.228, A.234, T.235, G.236, W.262 Ligands: BGC-BGC.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.66, A:Y.66, A:Y.202, A:E.228, A:T.235 Water bridges: A:N.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloster, T.M. et al., Structural, Thermodynamic, and Kinetic Analyses of Tetrahydrooxazine-Derived Inhibitors Bound to {Beta}-Glucosidases. J.Biol.Chem. (2004)

Release Date

2004-09-08

Peptides

ENDOGLUCANASE 5A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDOGLUCANASE 5A

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