SMTL ID : 1w9o.1 (1 other biounit)

Crystal structure of the PDZ tandem of human syntenin in complex with TNEYYV peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x ASN- GLU- TYR- TYR- VAL: TNEYYV PEPTIDE(Non-covalent)

ASN-GLU-TYR-TYR-VAL.1: 12 residues within 4Å: Chain A: H.101, V.102, G.103, F.104, I.105, F.106, K.107, V.115, D.144, S.145, A.148, L.151 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:H.101, A:F.104, A:I.105, A:I.105, A:V.115, A:D.144, A:A.148, A:L.151 Hydrogen bonds: A:V.102, A:G.103, A:F.104, A:F.104, A:F.106, A:F.106 Water bridges: A:G.100 Salt bridges: A:H.101 pi-Stacking: A:H.101

1 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.2: 4 residues within 4Å: Chain A: H.95, S.119, R.122, N.123 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.95 Hydrogen bonds: A:N.123 Salt bridges: A:H.95, A:R.122 pi-Stacking: A:H.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grembecka, J. et al., The Binding of the Pdz Tandem of Syntenin to Target Proteins. Biochemistry (2006)

Release Date

2006-03-22

Peptides

SYNTENIN 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SYNTENIN 1

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