- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- monomer
- Ligands
- 1 x VXX: METHYL VANILLATE(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 8 residues within 4Å:- Chain A: G.77, G.78, E.80, F.165, A.166, H.270, W.272
- Ligands: VXX.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:H.270
- Water bridges: A:G.78, A:G.78
GOL.3: 8 residues within 4Å:- Chain A: K.68, Y.69, N.70, E.106, P.107, Y.144, H.293
- Ligands: ACT.5
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:N.70, A:N.70, A:Y.144, A:Y.144
- Water bridges: A:N.70, A:H.293, A:H.295
GOL.4: 3 residues within 4Å:- Chain A: Q.127, R.130, N.178
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.127, A:N.178
- 1 x ACT: ACETATE ION(Non-functional Binders)
- 10 x CD: CADMIUM ION(Non-covalent)(Non-functional Binders)
CD.6: 3 residues within 4Å:- Chain A: C.35, H.98, M.101
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:C.35, A:H.98, H2O.6
CD.7: 5 residues within 4Å:- Chain A: E.106, H.288, E.291, H.295, H.297
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.106, A:H.288, A:E.291, A:H.295, A:H.297
CD.8: 1 residues within 4Å:- Chain A: E.219
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:E.219, A:E.219
CD.9: 2 residues within 4Å:- Chain A: H.159, H.292
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:H.159, A:H.292, H2O.8, H2O.12, H2O.12
CD.10: 2 residues within 4Å:- Chain A: H.293
- Ligands: CD.11
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:H.293, H2O.13, H2O.13
CD.11: 3 residues within 4Å:- Chain A: H.293
- Ligands: ACT.5, CD.10
1 PLIP interactions:1 Ligand-Ligand interactions- Metal complexes: ACT.5
CD.12: 3 residues within 4Å:- Chain A: E.138, Y.141, S.142
6 PLIP interactions:2 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:E.138, A:Y.141, H2O.7, H2O.8, H2O.8, H2O.8
CD.13: 3 residues within 4Å:- Chain A: K.244, L.246, F.249
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:K.244, A:L.246, A:F.249, H2O.11, H2O.11
CD.14: 3 residues within 4Å:- Chain A: H.288, E.289, L.290
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:H.288, H2O.12, H2O.12, H2O.12, H2O.12
CD.15: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tarbouriech, N. et al., Molecular Determinants of Substrate Specificity in the Feruloyl Esterase Module of Xylanase 10B from Clostridium Thermocellum. Acta Crystallogr.,Sect.D (2005)
- Release Date
- 2006-05-24
- Peptides
- ENDO-1,4-BETA-XYLANASE Y: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- monomer
- Ligands
- 1 x VXX: METHYL VANILLATE(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 1 x ACT: ACETATE ION(Non-functional Binders)
- 10 x CD: CADMIUM ION(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tarbouriech, N. et al., Molecular Determinants of Substrate Specificity in the Feruloyl Esterase Module of Xylanase 10B from Clostridium Thermocellum. Acta Crystallogr.,Sect.D (2005)
- Release Date
- 2006-05-24
- Peptides
- ENDO-1,4-BETA-XYLANASE Y: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A