SMTL ID : 1wkw.1

Crystal structure of the ternary complex of eIF4E-m7GpppA-4EBP1 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GTA: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE(Non-covalent)

GTA.1: 13 residues within 4Å: Chain A: W.30, M.75, W.76, E.77, R.131, K.133, K.136, A.178, T.179, K.180, S.181, G.182, T.185 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:W.76, A:A.178, A:T.179, A:G.182 Water bridges: A:R.86, A:R.86, A:R.86, A:N.129 Salt bridges: A:E.77, A:R.131, A:R.131, A:K.133, A:K.136, A:K.136, A:K.136 pi-Stacking: A:W.30, A:W.30, A:W.30, A:W.76, A:W.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tomoo, K. et al., Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods. Biochim.Biophys.Acta (2005)

Release Date

2005-06-10

Peptides

Eukaryotic translation initiation factor 4E: A
Eukaryotic translation initiation factor 4E binding protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Eukaryotic translation initiation factor 4E

Eukaryotic translation initiation factor 4E binding protein 1

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