SMTL ID : 3u7x.3 (2 other biounits)

Crystal structure of the human eIF4E-4EBP1 peptide complex without cap

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-2-2-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.42, K.65, D.96 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.42, A:K.65 SO4.2: 2 residues within 4Å: Chain A: R.157, K.162 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.157, A:K.162 SO4.3: 4 residues within 4Å: Chain A: E.171, N.172, R.173, E.174 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.173, A:E.174 Water bridges: A:N.172, A:A.175 SO4.15: 5 residues within 4Å: Chain A: K.192 Chain C: E.171, N.172, R.173, E.174 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain C Salt bridges: A:K.192, C:R.173 Hydrogen bonds: C:E.171, C:R.173, C:E.174

20 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.4: 3 residues within 4Å: Chain A: R.157, A.158, K.159 Ligand excluded by PLIP UNX.5: 3 residues within 4Å: Chain A: P.190, P.191, K.192 Ligand excluded by PLIP UNX.6: 2 residues within 4Å: Chain A: D.96, I.98 Ligand excluded by PLIP UNX.7: 2 residues within 4Å: Chain A: N.41, R.42 Ligand excluded by PLIP UNX.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.9: 2 residues within 4Å: Chain A: L.117, L.189 Ligand excluded by PLIP UNX.10: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.11: 2 residues within 4Å: Chain A: H.78 Ligands: UNX.12 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain A: H.78 Ligands: UNX.11 Ligand excluded by PLIP UNX.13: 2 residues within 4Å: Chain A: A.74, H.78 Ligand excluded by PLIP UNX.14: 1 residues within 4Å: Chain A: T.203 Ligand excluded by PLIP UNX.16: 2 residues within 4Å: Chain C: R.42, K.65 Ligand excluded by PLIP UNX.17: 2 residues within 4Å: Chain C: D.96, I.98 Ligand excluded by PLIP UNX.18: 2 residues within 4Å: Chain C: R.157, K.162 Ligand excluded by PLIP UNX.19: 2 residues within 4Å: Chain C: K.106, T.168 Ligand excluded by PLIP UNX.20: 2 residues within 4Å: Chain C: W.102, E.103 Ligand excluded by PLIP UNX.21: 2 residues within 4Å: Chain C: Q.120, R.123 Ligand excluded by PLIP UNX.22: 1 residues within 4Å: Chain D: I.6 Ligand excluded by PLIP UNX.23: 1 residues within 4Å: Chain C: H.78 Ligand excluded by PLIP UNX.24: 2 residues within 4Å: Chain C: A.74, N.77 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siddiqui, N. et al., Structural Insights into the Allosteric Effects of 4EBP1 on the Eukaryotic Translation Initiation Factor eIF4E. J.Mol.Biol. (2012)

Release Date

2011-11-02

Peptides

Eukaryotic translation initiation factor 4E: AC
Eukaryotic translation initiation factor 4E-binding protein 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
A

B
D

D
C

Eukaryotic translation initiation factor 4E

Eukaryotic translation initiation factor 4E-binding protein 1

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