SMTL ID : 1wl5.1

Human cytosolic acetoacetyl-CoA thiolase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-tetramer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.12, A.13, R.44, L.277, H.368 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.13 Salt bridges: A:R.44, A:H.368 SO4.2: 5 residues within 4Å: Chain A: Y.81 Chain B: H.156, E.289, P.290, S.291 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.291, B:S.291 Salt bridges: B:H.156 SO4.3: 4 residues within 4Å: Chain A: E.215, V.216, K.217, T.218 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.217, A:T.218, A:T.218 Water bridges: A:T.218, A:T.218 SO4.6: 5 residues within 4Å: Chain B: S.12, A.13, R.44, L.277, H.368 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.13 Salt bridges: B:R.44, B:H.368 SO4.7: 5 residues within 4Å: Chain A: H.156, E.289, P.290, S.291 Chain B: Y.81 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.291, A:S.291 Salt bridges: A:H.156 SO4.8: 4 residues within 4Å: Chain B: E.215, V.216, K.217, T.218 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.217, B:T.218, B:T.218 Water bridges: B:T.218, B:T.218 SO4.11: 5 residues within 4Å: Chain C: S.12, A.13, R.44, L.277, H.368 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:A.13 Salt bridges: C:R.44, C:H.368 SO4.12: 5 residues within 4Å: Chain C: Y.81 Chain D: H.156, E.289, P.290, S.291 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Hydrogen bonds: D:S.291, D:S.291 Salt bridges: D:H.156 Water bridges: C:Y.81, C:Y.81 SO4.13: 4 residues within 4Å: Chain C: E.215, V.216, K.217, T.218 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:K.217, C:T.218, C:T.218, C:T.218 SO4.16: 5 residues within 4Å: Chain D: S.12, A.13, R.44, L.277, H.368 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:A.13 Salt bridges: D:R.44, D:H.368 SO4.17: 5 residues within 4Å: Chain C: H.156, E.289, P.290, S.291 Chain D: Y.81 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:S.291, C:S.291 Salt bridges: C:H.156 Water bridges: D:Y.81, D:Y.81 SO4.18: 4 residues within 4Å: Chain D: E.215, V.216, K.217, T.218 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:K.217, D:T.218, D:T.218, D:T.218

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 5 residues within 4Å: Chain A: L.151, S.252, G.253, F.324, H.353 No protein-ligand interaction detected (PLIP) GOL.5: 6 residues within 4Å: Chain A: L.184, E.322, V.332, P.339, V.342, N.343 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.322, A:E.322, A:N.343 GOL.9: 5 residues within 4Å: Chain B: L.151, S.252, G.253, F.324, H.353 No protein-ligand interaction detected (PLIP) GOL.10: 6 residues within 4Å: Chain B: L.184, E.322, V.332, P.339, V.342, N.343 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.322, B:E.322, B:N.343 GOL.14: 5 residues within 4Å: Chain C: L.151, S.252, G.253, F.324, H.353 No protein-ligand interaction detected (PLIP) GOL.15: 6 residues within 4Å: Chain C: L.184, E.322, V.332, P.339, V.342, N.343 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.322, C:N.343 GOL.19: 5 residues within 4Å: Chain D: L.151, S.252, G.253, F.324, H.353 No protein-ligand interaction detected (PLIP) GOL.20: 6 residues within 4Å: Chain D: L.184, E.322, V.332, P.339, V.342, N.343 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:E.322, D:N.343

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kursula, P. et al., High Resolution Crystal Structures of Human Cytosolic Thiolase (CT): A Comparison of the Active Sites of Human CT, Bacterial Thiolase, and Bacterial KAS I. J.Mol.Biol. (2005)

Release Date

2005-03-01

Peptides

acetyl-Coenzyme A acetyltransferase 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

acetyl-Coenzyme A acetyltransferase 2

Related Entries With Identical Sequence