- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.2: 12 residues within 4Å:- Chain A: Y.229, I.232, L.242, H.243, D.260, D.271, H.350, V.360, H.361, E.383, R.404
- Chain D: S.39
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:H.243
PG4.6: 12 residues within 4Å:- Chain B: Y.229, I.232, L.242, H.243, D.260, D.271, H.350, V.360, H.361, E.383, R.404
- Chain C: S.39
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:H.243
PG4.10: 12 residues within 4Å:- Chain B: S.39
- Chain C: Y.229, I.232, L.242, H.243, D.260, D.271, H.350, V.360, H.361, E.383, R.404
No protein-ligand interaction detected (PLIP)PG4.14: 12 residues within 4Å:- Chain A: S.39
- Chain D: Y.229, I.232, L.242, H.243, D.260, D.271, H.350, V.360, H.361, E.383, R.404
No protein-ligand interaction detected (PLIP)- 8 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.3: 8 residues within 4Å:- Chain A: L.26, I.27, F.28, N.46, A.130, E.133, Y.134, W.165
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:E.133, A:E.133, A:Y.134, A:W.165
- Hydrogen bonds: A:F.28
IPA.4: 7 residues within 4Å:- Chain A: R.149, P.159, A.160, T.161, M.162
- Chain B: M.162, D.164
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:M.162
- Hydrogen bonds: A:R.149
- Water bridges: B:R.166
IPA.7: 8 residues within 4Å:- Chain B: L.26, I.27, F.28, N.46, A.130, E.133, Y.134, W.165
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:E.133, B:E.133, B:Y.134, B:W.165
- Hydrogen bonds: B:F.28
IPA.8: 7 residues within 4Å:- Chain A: M.162, D.164
- Chain B: R.149, P.159, A.160, T.161, M.162
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:M.162
- Hydrogen bonds: B:R.149
- Water bridges: A:R.166
IPA.11: 8 residues within 4Å:- Chain C: L.26, I.27, F.28, N.46, A.130, E.133, Y.134, W.165
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:E.133, C:E.133, C:Y.134, C:W.165
- Hydrogen bonds: C:F.28
IPA.12: 7 residues within 4Å:- Chain C: R.149, P.159, A.160, T.161, M.162
- Chain D: M.162, D.164
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain D- Hydrophobic interactions: C:M.162
- Hydrogen bonds: C:R.149
- Water bridges: D:R.166
IPA.15: 8 residues within 4Å:- Chain D: L.26, I.27, F.28, N.46, A.130, E.133, Y.134, W.165
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:E.133, D:E.133, D:Y.134, D:W.165
- Hydrogen bonds: D:F.28
IPA.16: 7 residues within 4Å:- Chain C: M.162, D.164
- Chain D: R.149, P.159, A.160, T.161, M.162
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:M.162
- Hydrogen bonds: D:R.149
- Water bridges: C:R.166
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Graham, S.C. et al., Structural and functional implications of metal ion selection in aminopeptidase p, a metalloprotease with a dinuclear metal center. Biochemistry (2005)
- Release Date
- 2005-08-16
- Peptides
- Xaa-Pro aminopeptidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 8 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Graham, S.C. et al., Structural and functional implications of metal ion selection in aminopeptidase p, a metalloprotease with a dinuclear metal center. Biochemistry (2005)
- Release Date
- 2005-08-16
- Peptides
- Xaa-Pro aminopeptidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A