SMTL ID : 1wzg.1

Crystal Structure Of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme oxygenase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: N.91, S.93, E.95, W.96, R.99 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.91, A:E.95 Water bridges: A:E.95 Salt bridges: A:R.99 SO4.2: 4 residues within 4Å: Chain A: S.26, T.27, H.205, A.209 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.27 Water bridges: A:H.25, A:F.28 Salt bridges: A:H.205 SO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.4: 3 residues within 4Å: Chain A: S.138, K.173, R.177 3 PLIP interactions: 3 interactions with chain A Water bridges: A:S.138 Salt bridges: A:K.173, A:R.177 SO4.5: 3 residues within 4Å: Chain A: R.112, E.115, H.192 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.115 Water bridges: A:R.112, A:N.119 Salt bridges: A:R.112, A:H.192 SO4.7: 3 residues within 4Å: Chain B: S.26, T.27, H.205 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.27 Water bridges: B:F.28 Salt bridges: B:H.205

2 x YOM: 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON(Non-covalent)

YOM.6: 13 residues within 4Å: Chain A: H.20, A.23, E.24, Y.130, V.131, R.132, L.134, G.135, S.138, G.139, F.201, N.204, F.208 10 PLIP interactions: 10 interactions with chain A, Hydrophobic interactions: A:A.23, A:V.131, A:L.134, A:L.134, A:F.201, A:F.201, A:N.204, A:F.208 Metal complexes: A:H.20, A:E.24 YOM.8: 13 residues within 4Å: Chain B: H.20, A.23, E.24, Y.130, V.131, R.132, L.134, G.135, S.138, G.139, F.201, N.204, F.208 9 PLIP interactions: 9 interactions with chain B, Hydrophobic interactions: B:A.23, B:Y.130, B:L.134, B:F.201, B:F.201, B:N.204, B:F.208 Metal complexes: B:H.20, B:E.24

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.9: 11 residues within 4Å: Chain A: G.38, V.39, H.150, Y.151 Chain B: R.112, E.115, I.116, N.119, D.121, H.192, E.196 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.196, B:E.196, A:V.39 Water bridges: B:E.115, A:A.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ueno, T. et al., Design of metal cofactors activated by a protein-protein electron transfer system. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-02-21

Peptides

Heme oxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Heme oxygenase

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