SMTL ID : 4gpc.1 (2 other biounits)

Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x BLA: BILIVERDINE IX ALPHA(Non-covalent)

BLA.1: 16 residues within 4Å: Chain A: K.13, H.20, A.23, E.24, M.29, L.33, Y.130, V.131, G.135, S.138, G.139, I.143, R.177, F.201, N.204, F.208 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:A.23, A:Y.130, A:V.131, A:I.143, A:F.201, A:F.201, A:N.204, A:F.208 Hydrogen bonds: A:H.20, A:Y.130, A:Y.130, A:S.138, A:S.138 Water bridges: A:H.20 Salt bridges: A:K.13, A:K.13, A:R.177, A:R.177 pi-Cation interactions: A:H.20

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: A.167, K.168, L.169, K.170 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.169, A:K.170 SO4.3: 4 residues within 4Å: Chain A: S.26, T.27, H.205, A.209 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.27 Water bridges: A:K.22, A:H.25, A:F.28 Salt bridges: A:H.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Unno, M. et al., Crystal Structures of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae. To be Published

Release Date

2013-08-21

Peptides

Heme oxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heme oxygenase

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