SMTL ID : 1xio.1 (1 other biounit)

Anabaena sensory rhodopsin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x RET: RETINAL(Covalent)

RET.1: 14 residues within 4Å: Chain A: W.76, T.80, L.83, V.112, G.116, Y.132, G.135, V.136, F.139, W.176, Y.179, P.180, W.183, K.210 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:T.80, A:L.83, A:V.112, A:Y.132, A:F.139, A:W.176, A:W.176, A:Y.179, A:Y.179, A:Y.179, A:Y.179, A:Y.179, A:P.180, A:K.210

13 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)(Non-functional Binders)

PEE.2: 6 residues within 4Å: Chain A: M.1, W.9, V.12, T.16 Ligands: PEE.7, PEE.8 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.9, A:W.9, A:V.12 PEE.3: 8 residues within 4Å: Chain A: I.10, I.17, Y.171, F.207, F.208, V.211, G.212, F.215 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.10, A:I.17, A:F.207, A:F.208, A:V.211, A:F.215, A:F.215 PEE.4: 2 residues within 4Å: Chain A: L.6 Ligands: PEE.8 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.6 PEE.5: 5 residues within 4Å: Chain A: R.124, W.126, L.130, W.131, C.134 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.126, A:W.126, A:L.130, A:W.131, A:W.131 PEE.6: 7 residues within 4Å: Chain A: Y.132, L.140, L.143, W.147, R.151, I.177, P.180 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.140, A:L.143, A:W.147, A:W.147, A:I.177, A:P.180 PEE.7: 2 residues within 4Å: Ligands: PEE.2, PEE.8 No protein-ligand interaction detected (PLIP) PEE.8: 3 residues within 4Å: Ligands: PEE.2, PEE.4, PEE.7 No protein-ligand interaction detected (PLIP) PEE.9: 5 residues within 4Å: Chain A: F.104, A.138, I.141, W.144, P.149 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.104, A:F.104, A:A.138, A:I.141, A:W.144, A:P.149 PEE.10: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PEE.11: 5 residues within 4Å: Chain A: C.134, C.137, I.141, W.144 Ligands: PEE.13 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.141, A:W.144 PEE.12: 8 residues within 4Å: Chain A: V.12, T.16, L.20, W.23, L.38, I.45, G.48, L.49 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.12, A:L.20, A:W.23, A:W.23, A:L.38, A:I.45, A:I.45, A:L.49 PEE.13: 4 residues within 4Å: Chain A: C.137, L.140, W.144 Ligands: PEE.11 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.140, A:W.144 PEE.14: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vogeley, L. et al., Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A. Science (2004)

Release Date

2004-10-05

Peptides

ANABAENA SENSORY RHODOPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ANABAENA SENSORY RHODOPSIN

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