SMTL ID : 1xm8.1 (1 other biounit)

X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.54, H.56, H.59, H.112, D.131 Ligands: FE.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.54, A:H.56, A:H.112, A:D.131, H2O.1

1 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: D.58, H.59, D.131, H.169 Ligands: ZN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.58, A:H.59, A:D.131, A:H.169, H2O.1

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 8 residues within 4Å: Chain A: F.134, S.137, C.138, K.140, Y.171, N.175, R.248, K.251 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.134, A:Y.171 Hydrogen bonds: A:S.137 Water bridges: A:K.140 Salt bridges: A:K.140, A:R.248, A:K.251

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain A: L.199, K.202, L.204 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.202

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marasinghe, G.P. et al., Structural studies on a mitochondrial glyoxalase II. J.Biol.Chem. (2005)

Release Date

2004-10-12

Peptides

glyoxalase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

glyoxalase II

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